RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 LRRC43Q8N309 656 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 RASSF8Q8NHQ8 419 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 KIF2CQ99661 725 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 TRIM6Q9C030 488 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 TMEM60Q9H2L4 133 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 ADAMTS10Q9H324 1103 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 NSUN3Q9H649 340 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 CLDND1Q9NY35 253 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 LAMA2P24043 3122 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 A0A087WWV3 80 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 LRRIQ4A6NIV6 560 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 WNT7AO00755 349 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 DGAT1O75907 488 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 HSP90AA1P07900 732 aaKnown RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 LAG3P18627 525 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 KCNA5P22460 613 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 TRAPPC10P48553 1259 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 LAMTOR4Q0VGL1 99 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 ORC2Q13416 577 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 BMS1Q14692 1282 aaKnown RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 TCEAL5Q5H9L2 206 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 B3GNT9Q6UX72 402 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 ZBTB8OSQ8IWT0 167 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 LINC01465Q8N7H1 131 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 SNX29Q8TEQ0 813 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 PRPF31Q8WWY3 499 aaKnown RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 PGBD4Q96DM1 585 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 FAM193BQ96PV7 902 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 ASB2Q96Q27 587 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 UHRF1Q96T88 793 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 APOL6Q9BWW8 343 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 PLVAPQ9BX97 442 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 TMEM117Q9H0C3 514 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 GBP3Q9H0R5 595 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 POLR3FQ9H1D9 316 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 TUFT1Q9NNX1 390 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 ENTPD7Q9NQZ7 604 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 WRAP73Q9P2S5 460 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 PUF60Q9UHX1 559 aaKnown RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 TCF20Q9UGU0 1960 aaKnown RBP10.1□□□□□ -0.79
CMTM1-208ENST00000479381 KIAA1671Q9BY89 1806 aa10.1□□□□□ -0.79
CMTM1-208ENST00000479381 C9IYK1 514 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 ZBTB39O15060 712 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 GRM6O15303 877 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 ASAP2O43150 1006 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 SLITRK3O94933 977 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 SSBP05455 408 aaKnown RBP eCLIP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 NDUFV1P49821 464 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 RAB27AP51159 221 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 DTHD1Q6ZMT9 781 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 FAM43BQ6ZT52 329 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 FERMT3Q86UX7 667 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 HACE1Q8IYU2 909 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 ZNF689Q96CS4 500 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 ELAC1Q9H777 363 aaKnown RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 UBE2ZQ9H832 354 aaPredicted RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 CHST12Q9NRB3 414 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 ANKEF1Q9NU02 776 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 TYW1Q9NV66 732 aaKnown RBP10.09□□□□□ -0.79
CMTM1-208ENST00000479381 LRWD1Q9UFC0 647 aa10.09□□□□□ -0.79
CMTM1-208ENST00000479381 IGKV6-21A0A0C4DH24 114 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 ZC3H11AO75152 810 aaKnown RBP eCLIP10.08□□□□□ -0.8
CMTM1-208ENST00000479381 MED24O75448 989 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 STBD1O95210 358 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 POU3F3P20264 500 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-208ENST00000479381 SSTR3P32745 418 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-208ENST00000479381 RARRES1P49788 294 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 KCNQ1P51787 676 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 KRT17Q04695 432 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 SPIRE1Q08AE8 756 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 PTGDRQ13258 359 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 CLUL1Q15846 466 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 RILPL1Q5EBL4 403 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 PLPP4Q5VZY2 271 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms