RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 C1orf186Q6ZWK4 172 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 USP49Q70CQ1 688 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 Q7L0L9 218 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 RAD54LQ92698 747 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 ELAC1Q9H777 363 aaKnown RBP22.66■■□□□ 1.22
VARS-224ENST00000479051 DMP1Q13316 513 aaPredicted RBP22.65■■□□□ 1.22
VARS-224ENST00000479051 LARP4BQ92615 738 aaKnown RBP22.65■■□□□ 1.22
VARS-224ENST00000479051 FAM161BQ96MY7 647 aa22.65■■□□□ 1.22
VARS-224ENST00000479051 TTYH1Q9H313 450 aaPredicted RBP22.65■■□□□ 1.22
VARS-224ENST00000479051 MINDY3Q9H8M7 445 aa22.65■■□□□ 1.22
VARS-224ENST00000479051 C17orf75Q9HAS0 396 aa22.65■■□□□ 1.22
VARS-224ENST00000479051 PRMT7Q9NVM4 692 aaPredicted RBP22.65■■□□□ 1.22
VARS-224ENST00000479051 TMEM161AQ9NX61 479 aa22.65■■□□□ 1.22
VARS-224ENST00000479051 HOXA2O43364 376 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 KRT18P05783 430 aaKnown RBP22.64■■□□□ 1.21
VARS-224ENST00000479051 DDIT3P35638 169 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 EFNA5P52803 228 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 FAM189BP81408 668 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 MBTD1Q05BQ5 628 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 DHX8Q14562 1220 aaKnown RBP22.64■■□□□ 1.21
VARS-224ENST00000479051 CDCA2Q69YH5 1023 aaPredicted RBP22.64■■□□□ 1.21
VARS-224ENST00000479051 GPBP1Q86WP2 473 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 CCDC51Q96ER9 411 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 TRAIPQ9BWF2 469 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 BLOC1S4Q9NUP1 217 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 RCOR1Q9UKL0 485 aa22.64■■□□□ 1.21
VARS-224ENST00000479051 PHLPP2Q6ZVD8 1323 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 ADGRA3Q8IWK6 1321 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 A0A0U1RQF3 1178 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 LCHNA4D1U4 455 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 CCDC169A6NNP5 214 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 DGKIO75912 1065 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 STAT6P42226 847 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 RAB27AP51159 221 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 TAP1Q03518 808 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 MCM6Q14566 821 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 MAPK6Q16659 721 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 NOTUMQ6P988 496 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 ECHDC2Q86YB7 292 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 SP7Q8TDD2 431 aaPredicted RBP22.63■■□□□ 1.21
VARS-224ENST00000479051 BSNDQ8WZ55 320 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 SPATA32Q96LK8 384 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 SCAND2PQ9GZW5 306 aaPredicted RBP22.63■■□□□ 1.21
VARS-224ENST00000479051 MTMR10Q9NXD2 777 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 ODF2LQ9ULJ1 636 aa22.63■■□□□ 1.21
VARS-224ENST00000479051 TSPAN1O60635 241 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 EOMESO95936 686 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 PEX3P56589 373 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 RAD51AP2Q09MP3 1159 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 BTG3Q14201 252 aaPredicted RBP22.62■■□□□ 1.21
VARS-224ENST00000479051 CMTR2Q8IYT2 770 aaKnown RBP22.62■■□□□ 1.21
VARS-224ENST00000479051 CRIPAKQ8N1N5 446 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 FIBCD1Q8N539 461 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 TGS1Q96RS0 853 aaKnown RBP22.62■■□□□ 1.21
VARS-224ENST00000479051 POLD4Q9HCU8 107 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 FAM13BQ9NYF5 915 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 COL4A6Q14031 1691 aa22.62■■□□□ 1.21
VARS-224ENST00000479051 LINC01553A4QN01 128 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 SMTNP53814 917 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 TMEM132AQ24JP5 1023 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 SV2BQ7L1I2 683 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 ABI1Q8IZP0 508 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 RNF169Q8NCN4 708 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 ZNF689Q96CS4 500 aaPredicted RBP22.61■■□□□ 1.21
VARS-224ENST00000479051 SAMD11Q96NU1 681 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 KMT5AQ9NQR1 393 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 FAM105AQ9NUU6 356 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 LARSQ9P2J5 1176 aaKnown RBP22.61■■□□□ 1.21
VARS-224ENST00000479051 PCDHA7Q9UN72 937 aa22.61■■□□□ 1.21
VARS-224ENST00000479051 RBM19Q9Y4C8 960 aaKnown RBP22.61■■□□□ 1.21
VARS-224ENST00000479051 TBCAO75347 108 aaKnown RBP22.6■■□□□ 1.21
VARS-224ENST00000479051 PRKCBP05771 671 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 PLS3P13797 630 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 NPTX2P47972 431 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 MAPK7Q13164 816 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 FAM187BQ17R55 369 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 AXDND1Q5T1B0 1012 aaPredicted RBP22.6■■□□□ 1.21
VARS-224ENST00000479051 DAW1Q8N136 415 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 CNNM3Q8NE01 707 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 RSPH1Q8WYR4 309 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 PGBD4Q96DM1 585 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 PANK2Q9BZ23 570 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 FZD8Q9H461 694 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 RC3H2Q9HBD1 1191 aaKnown RBP22.6■■□□□ 1.21
VARS-224ENST00000479051 RWDD3Q9Y3V2 267 aa22.6■■□□□ 1.21
VARS-224ENST00000479051 H0YCG3 227 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 FAM13AO94988 1023 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 LIG1P18858 919 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 HOXA11P31270 313 aaPredicted RBP22.59■■□□□ 1.21
VARS-224ENST00000479051 PRPF4BQ13523 1007 aaKnown RBP22.59■■□□□ 1.21
VARS-224ENST00000479051 GRIN2CQ14957 1233 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 ARSHQ5FYA8 562 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 PDILTQ8N807 584 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 LRRC15Q8TF66 581 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 LEO1Q8WVC0 666 aaPredicted RBP22.59■■□□□ 1.21
VARS-224ENST00000479051 SPIRE2Q8WWL2 714 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 ARNTL2Q8WYA1 636 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 GAS2L1Q99501 681 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms