RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ESYT3A0FGR9 886 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 PPP1R3GB7ZBB8 358 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 ATP1A1P05023 1023 aaKnown RBP15.23■□□□□ 0.03
NPHP4-208ENST00000478423 UCHL3P15374 230 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 NPEPPSP55786 919 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 ARPP19P56211 112 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 CUL1Q13616 776 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 PLA2G4FQ68DD2 849 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 KIAA1841Q6NSI8 718 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 DNAAF3Q8N9W5 541 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 ASB14A6NK59 587 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 OATP04181 439 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 RFX1P22670 979 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 GNA15P30679 374 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 COPB2P35606 906 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 CAP2P40123 477 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 DUOXA2Q1HG44 320 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 RAD9BQ6WBX8 426 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 RASGRF2O14827 1237 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 RPS12P25398 132 aaKnown RBP15.23■□□□□ 0.03
NPHP4-208ENST00000478423 KCNJ6P48051 423 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 PKN1Q16512 942 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 GLE1Q53GS7 698 aaKnown RBP15.23■□□□□ 0.03
NPHP4-208ENST00000478423 LRRC8CQ8TDW0 803 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 SEPT1Q8WYJ6 367 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 LRFN2Q9ULH4 789 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 NOVA2Q9UNW9 492 aaKnown RBP15.23■□□□□ 0.03
NPHP4-208ENST00000478423 GYPCP04921 128 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 GNAT1P11488 350 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ACOT2P49753 483 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ZKSCAN8Q15776 578 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-208ENST00000478423 PDIK1LQ8N165 341 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 FBXL16Q8N461 479 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 RFFLQ8WZ73 363 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 NUP85Q9BW27 656 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 BAIAP2L1Q9UHR4 511 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ITIH6Q6UXX5 1313 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 PITPNM2Q9BZ72 1349 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 PODXLO00592 558 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ACSL3O95573 720 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 GTF2A1P52655 376 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-208ENST00000478423 EFNA5P52803 228 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ALS2CLQ60I27 953 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 CC2D1AQ6P1N0 951 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-208ENST00000478423 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 ZBED1O96006 694 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 CCHCR1Q8TD31 782 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 PPP4R1Q8TF05 950 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-208ENST00000478423 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 FAM205AQ6ZU69 1335 aa15.22■□□□□ 0.03
NPHP4-208ENST00000478423 CYP26A1O43174 497 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 SLC9A1P19634 815 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 FMO5P49326 533 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 SLC18A3Q16572 532 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 ARHGEF18Q6ZSZ5 1173 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 ENOSF1Q7L5Y1 443 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 ELOA2Q8IYF1 753 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-208ENST00000478423 ARHGAP24Q8N264 748 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 HSPH1Q92598 858 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 UBE4BO95155 1302 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 MSH4O15457 936 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 TJP3O95049 919 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 TIPINQ9BVW5 301 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 KCND2Q9NZV8 630 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 MRFAP1Q9Y605 127 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 EXOC1LA0A1B0GW35 172 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 SSU72P8A0A1W2PR75 194 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 CPP00450 1065 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 CALB1P05937 261 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 RASSF2P50749 326 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 IL17RBQ9NRM6 502 aa15.21■□□□□ 0.03
NPHP4-208ENST00000478423 DIS3Q9Y2L1 958 aaKnown RBP15.21■□□□□ 0.03
NPHP4-208ENST00000478423 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.02
NPHP4-208ENST00000478423 HUS1O60921 280 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 GMNNO75496 209 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 IL9RQ01113 521 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 TMED2Q15363 201 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 GSPT2Q8IYD1 628 aaKnown RBP15.21■□□□□ 0.02
NPHP4-208ENST00000478423 GSDMBQ8TAX9 411 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 ZKSCAN4Q969J2 545 aaPredicted RBP15.21■□□□□ 0.02
NPHP4-208ENST00000478423 TAAR1Q96RJ0 339 aa15.21■□□□□ 0.02
NPHP4-208ENST00000478423 POLRMTO00411 1230 aaKnown RBP15.2■□□□□ 0.02
NPHP4-208ENST00000478423 PLS3P13797 630 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 CIITAP33076 1130 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 CXCL9Q07325 125 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 RBM41Q96IZ5 413 aaKnown RBP15.2■□□□□ 0.02
NPHP4-208ENST00000478423 CFAP57Q96MR6 1250 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 PFDN4Q9NQP4 134 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 FAM217BQ9NTX9 383 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-208ENST00000478423 APEX2Q9UBZ4 518 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 MAGED2Q9UNF1 606 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-208ENST00000478423 STK38LQ9Y2H1 464 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms