RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 LLGL2Q6P1M3 1020 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 RHPN2Q8IUC4 686 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 FBXL6Q8N531 539 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 SLC7A3Q8WY07 619 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 ASIC4Q96FT7 647 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
ABCF3-212ENST00000478288 PHF20Q9BVI0 1012 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 ZBP1Q9H171 429 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 CYP26B1Q9NR63 512 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 AGPAT5Q9NUQ2 364 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 FAM105AQ9NUU6 356 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 DZANK1Q9NVP4 752 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
ABCF3-212ENST00000478288 PTPRZ1P23471 2315 aaPredicted RBP14.56□□□□□ -0.08
ABCF3-212ENST00000478288 FAM186AA6NE01 2351 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 TMEM150BA6NC51 233 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 CLASP2O75122 1294 aaKnown RBP14.55□□□□□ -0.08
ABCF3-212ENST00000478288 ZC3H11AO75152 810 aaKnown RBP eCLIP14.55□□□□□ -0.08
ABCF3-212ENST00000478288 CSDE1O75534 798 aaKnown RBP14.55□□□□□ -0.08
ABCF3-212ENST00000478288 CTSAP10619 480 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 XBP1P17861 261 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 RFC5P40937 340 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 PCBP1Q15365 356 aaKnown RBP eCLIP14.55□□□□□ -0.08
ABCF3-212ENST00000478288 INF2Q27J81 1249 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 NOMO2Q5JPE7 1267 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 CATSPER4Q7RTX7 472 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 NEK8Q86SG6 692 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 DDX53Q86TM3 631 aaKnown RBP14.55□□□□□ -0.08
ABCF3-212ENST00000478288 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 IGSF21Q96ID5 467 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 NLRP4Q96MN2 994 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 AIFM3Q96NN9 605 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 DHX33Q9H6R0 707 aaKnown RBP14.55□□□□□ -0.08
ABCF3-212ENST00000478288 IFT122Q9HBG6 1241 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 TBC1D13Q9NVG8 400 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 COL4A3BPQ9Y5P4 624 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 WDR87Q6ZQQ6 2873 aa14.55□□□□□ -0.08
ABCF3-212ENST00000478288 CCDC194A0A1B0GVG4 234 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 EML1O00423 815 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 OFD1O75665 1012 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 P4HBP07237 508 aaKnown RBP14.54□□□□□ -0.08
ABCF3-212ENST00000478288 GALTP07902 379 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 MTHFRP42898 656 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 NUBP1P53384 320 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 LETM2Q2VYF4 491 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 PLA2G4FQ68DD2 849 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 TMEM173Q86WV6 379 aaPredicted RBP14.54□□□□□ -0.08
ABCF3-212ENST00000478288 C4orf19Q8IY42 314 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 UBALD2Q8IYN6 164 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 VPS52Q8N1B4 723 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
ABCF3-212ENST00000478288 RIPOR3Q96MK2 946 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 SH2D3AQ9BRG2 576 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 PDRG1Q9NUG6 133 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 CNTNAP2Q9UHC6 1331 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 SPTBN4Q9H254 2564 aa14.54□□□□□ -0.08
ABCF3-212ENST00000478288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.53□□□□□ -0.08
ABCF3-212ENST00000478288 CXCL14O95715 111 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 SCRN1Q12765 414 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 KIAA1841Q6NSI8 718 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 MRPL10Q7Z7H8 261 aaKnown RBP14.53□□□□□ -0.08
ABCF3-212ENST00000478288 PPFIBP1Q86W92 1011 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 KSR1Q8IVT5 923 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 PRSS33Q8NF86 280 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 URGCPQ8TCY9 931 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 HAS1Q92839 578 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 LPPQ93052 612 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 CEP170P1Q96L14 293 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 POMKQ9H5K3 350 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 NRDE2Q9H7Z3 1164 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 KANSL3Q9P2N6 904 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 KCNJ14Q9UNX9 436 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 USTQ9Y2C2 406 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 PCDHB2Q9Y5E7 798 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 C2orf16Q68DN1 1984 aa14.53□□□□□ -0.08
ABCF3-212ENST00000478288 TDRD15B5MCY1 1934 aaKnown RBP14.53□□□□□ -0.08
ABCF3-212ENST00000478288 NT5C1B-RDH14C9J2C7 533 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 ASAP2O43150 1006 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 YWHABP31946 246 aaKnown RBP14.52□□□□□ -0.09
ABCF3-212ENST00000478288 RNASELQ05823 741 aaKnown RBP14.52□□□□□ -0.09
ABCF3-212ENST00000478288 STK3Q13188 491 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 MTMR3Q13615 1198 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 EPHA7Q15375 998 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 OTUD6AQ7L8S5 288 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 SLFN12Q8IYM2 578 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 CNNM3Q8NE01 707 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 SLC22A17Q8WUG5 538 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 TCP11Q8WWU5 503 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 PRPF31Q8WWY3 499 aaKnown RBP14.52□□□□□ -0.09
ABCF3-212ENST00000478288 LXNQ9BS40 222 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 TMEM175Q9BSA9 504 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 IRF2BPLQ9H1B7 796 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 UBN1Q9NPG3 1134 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 WRAP73Q9P2S5 460 aaPredicted RBP14.52□□□□□ -0.09
ABCF3-212ENST00000478288 SORCS3Q9UPU3 1222 aa14.52□□□□□ -0.09
ABCF3-212ENST00000478288 MEIS3P2A8K0S8 358 aa14.51□□□□□ -0.09
ABCF3-212ENST00000478288 INPPL1O15357 1258 aa14.51□□□□□ -0.09
ABCF3-212ENST00000478288 CCNT1O60563 726 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms