RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 PHOSPHO2Q8TCD6 241 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 KCNG4Q8TDN1 519 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 RAD54LQ92698 747 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 TIFAQ96CG3 184 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 FAM161BQ96MY7 647 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 KIFC3Q9BVG8 833 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 FTHL17Q9BXU8 183 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 INO80BQ9C086 356 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-222ENST00000478095 CCSER1Q9C0I3 900 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 CCDC39Q9UFE4 941 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 MSRAQ9UJ68 235 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
HDAC6-222ENST00000478095 TET1Q8NFU7 2136 aa11.38□□□□□ -0.59
HDAC6-222ENST00000478095 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
HDAC6-222ENST00000478095 LCHNA4D1U4 455 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 SFI1A8K8P3 1242 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 SLC26A4O43511 780 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 CUTAO60888 179 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 GJB5O95377 273 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 CA3P07451 260 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 LIG1P18858 919 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 PTENP60484 403 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 NUCB2P80303 420 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 DSC3Q14574 896 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 RAB30Q15771 203 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-222ENST00000478095 SHC4Q6S5L8 630 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 GPBP1Q86WP2 473 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 DAW1Q8N136 415 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 PDILTQ8N807 584 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 LARP4BQ92615 738 aaKnown RBP11.37□□□□□ -0.59
HDAC6-222ENST00000478095 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 SPATA32Q96LK8 384 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 GDPD2Q9HCC8 539 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 PCDHA11Q9Y5I1 949 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 ATP6V1DQ9Y5K8 247 aa11.37□□□□□ -0.59
HDAC6-222ENST00000478095 ADGRA3Q8IWK6 1321 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
HDAC6-222ENST00000478095 B4GALT5O43286 388 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 ERLIN2O94905 339 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-222ENST00000478095 GUCY2CP25092 1073 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 STAT6P42226 847 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 MBTD1Q05BQ5 628 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 MAPK7Q13164 816 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 NAALADL2Q58DX5 795 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 RRAGBQ5VZM2 374 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 PPP2R2DQ66LE6 453 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 SPRED2Q7Z698 418 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 DEPTORQ8TB45 409 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 LEO1Q8WVC0 666 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-222ENST00000478095 KIFAP3Q92845 792 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 YME1L1Q96TA2 773 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 TTYH1Q9H313 450 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-222ENST00000478095 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 AGPAT5Q9NUQ2 364 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 RCOR1Q9UKL0 485 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 SIP14410 1827 aa11.36□□□□□ -0.59
HDAC6-222ENST00000478095 KAT6AQ92794 2004 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 C9IYK1 514 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 TSPAN1O60635 241 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 KRT18P05783 430 aaKnown RBP11.35□□□□□ -0.59
HDAC6-222ENST00000478095 NAMPTP43490 491 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 SARSP49591 514 aaKnown RBP11.35□□□□□ -0.59
HDAC6-222ENST00000478095 GATMP50440 423 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 PEX3P56589 373 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 AMHR2Q16671 573 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 LONRF3Q496Y0 759 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 CDCA2Q69YH5 1023 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-222ENST00000478095 TWF2Q6IBS0 349 aaKnown RBP11.35□□□□□ -0.59
HDAC6-222ENST00000478095 CCDC73Q6ZRK6 1079 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 SLC24A5Q71RS6 500 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 NPAS4Q8IUM7 802 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 ZBTB8OSQ8IWT0 167 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 DEFB123Q8N688 67 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 DHX58Q96C10 678 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 CPB2Q96IY4 423 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 DRC1Q96MC2 740 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 RAD9AQ99638 391 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 CERS4Q9HA82 394 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 LRFN2Q9ULH4 789 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 USP20Q9Y2K6 914 aa11.35□□□□□ -0.59
HDAC6-222ENST00000478095 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 FGFR1P11362 822 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms