RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 FAM160B1Q5W0V3 765 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 ABHD15Q6UXT9 468 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 GADL1Q6ZQY3 521 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 ANKRD23Q86SG2 305 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 REXO1L1PQ8IX06 675 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 BANK1Q8NDB2 785 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 NEK11Q8NG66 645 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 AFAP1L1Q8TED9 768 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 PIGOQ8TEQ8 1089 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 HLA-CQ95604 372 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 OPTNQ96CV9 577 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 WNK4Q96J92 1243 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 FAM167AQ96KS9 214 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 ACCSQ96QU6 501 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 BEGAINQ9BUH8 593 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 TSGA10Q9BZW7 698 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 L2HGDHQ9H9P8 463 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 ZCCHC17Q9NP64 241 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 DMAC2Q9NW81 257 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 FRMD4BQ9Y2L6 1034 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 BZW2Q9Y6E2 419 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 ZNF236Q9UL36 1845 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 DNAJC25-GNG10A0A024R161 153 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 NPHP3-ACAD11A0A0J9YXS1 232 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 ASB14A6NK59 587 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 EIF3CLB5ME19 914 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 PES1O00541 588 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 TGFB1I1O43294 461 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 STRNO43815 780 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 KIF5CO60282 957 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 ATP9AO75110 1047 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 HIP1RO75146 1068 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 ZMYND10O75800 440 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 GFPT2O94808 682 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 LCA5LO95447 670 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 AFPP02771 609 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 HOXC6P09630 235 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 MYBP10242 640 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 ACTR2P61160 394 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 CETN1Q12798 172 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 DMP1Q13316 513 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 MOGSQ13724 837 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 PLS1Q14651 629 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 PKDCCQ504Y2 493 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 METTL7BQ6UX53 244 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 INTS8Q75QN2 995 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 MTERF4Q7Z6M4 381 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 CREBRFQ8IUR6 639 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 C17orf53Q8N3J3 647 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 MSL3Q8N5Y2 521 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 UBE2Q2Q8WVN8 375 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 SLC10A4Q96EP9 437 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 BORCS6Q96GS4 357 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 PCMTD1Q96MG8 357 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 EIF3CQ99613 913 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 JPH2Q9BR39 696 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 NIFKQ9BYG3 293 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 ATP6V0A4Q9HBG4 840 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 PKD2L1Q9P0L9 805 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 BTBD7Q9P203 1132 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 MORF4L1Q9UBU8 362 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 DIS3Q9Y2L1 958 aaKnown RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 MAFBQ9Y5Q3 323 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 EPN1Q9Y6I3 576 aaPredicted RBP7.3□□□□□ -1.24
LDB3-206ENST00000477489 ZMYM2Q9UBW7 1377 aa7.3□□□□□ -1.24
LDB3-206ENST00000477489 SIP14410 1827 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 ZNFX1Q9P2E3 1918 aaKnown RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 USP27XA6NNY8 438 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 RSPH10B2B2RC85 870 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 K7ENM7 598 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 DDX39AO00148 427 aaKnown RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 CTIFO43310 598 aaKnown RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 CNMDO75829 334 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 PRPF6O94906 941 aaKnown RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 NDUFA10O95299 355 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 CCDC172P0C7W6 258 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 RSPH10BP0C881 870 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 ERCC3P19447 782 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 HOXD13P35453 343 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 MMP16P51512 607 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 CASP5P51878 434 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 KCNH2Q12809 1159 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 PRKG1Q13976 671 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 BRDTQ58F21 947 aaPredicted RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 XKR9Q5GH70 373 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 C10orf76Q5T2E6 689 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 GPAT2Q6NUI2 795 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 RAD9BQ6WBX8 426 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 GBP6Q6ZN66 633 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 CACNA2D4Q7Z3S7 1137 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 NCAPG2Q86XI2 1143 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 MAP4K3Q8IVH8 894 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 NELFCDQ8IXH7 590 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 FAM186BQ8IYM0 893 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 DAW1Q8N136 415 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 GLIS3Q8NEA6 775 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms