RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 STK25O00506 426 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 SLC27A2O14975 620 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 ADAMTS3O15072 1205 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 B4GALT3O60512 393 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 OATP04181 439 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 CFHP08603 1231 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 KLRC2P26717 231 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 SLC11A1P49279 550 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 DRP2Q13474 957 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.35
BRCA1-213ENST00000476777 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 NOMO2Q5JPE7 1267 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 APOA5Q6Q788 366 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 GLB1LQ6UWU2 654 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 CMASQ8NFW8 434 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-213ENST00000476777 RSAD2Q8WXG1 361 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 RIN2Q8WYP3 895 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-213ENST00000476777 EMILIN2Q9BXX0 1053 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-213ENST00000476777 TBC1D17Q9HA65 648 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 RBM28Q9NW13 759 aaKnown RBP12.84□□□□□ -0.35
BRCA1-213ENST00000476777 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 TCEAL9Q9UHQ7 104 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 SAMM50Q9Y512 469 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 WDR64B1ANS9 1081 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 ZNF623O75123 536 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 OFD1O75665 1012 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
BRCA1-213ENST00000476777 PRKCEQ02156 737 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 RNASELQ05823 741 aaKnown RBP12.83□□□□□ -0.36
BRCA1-213ENST00000476777 TBC1D8BQ0IIM8 1120 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.36
BRCA1-213ENST00000476777 UGCGQ16739 394 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 RTN1Q16799 776 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 PRR16Q569H4 304 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
BRCA1-213ENST00000476777 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 ZNF280BQ86YH2 543 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 EXOC6Q8TAG9 804 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 LENG9Q96B70 501 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 LSG1Q9H089 658 aaKnown RBP12.83□□□□□ -0.36
BRCA1-213ENST00000476777 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 WDR6Q9NNW5 1121 aaKnown RBP12.83□□□□□ -0.36
BRCA1-213ENST00000476777 DISC1Q9NRI5 854 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 EPS15L1Q9UBC2 864 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 INPP5FQ9Y2H2 1132 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 USP24Q9UPU5 2620 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 DOCK6Q96HP0 2047 aa12.83□□□□□ -0.36
BRCA1-213ENST00000476777 F5P12259 2224 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 SRFP11831 508 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 SKIP12755 728 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
BRCA1-213ENST00000476777 CIITAP33076 1130 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 NONOQ15233 471 aaKnown RBP eCLIP12.82□□□□□ -0.36
BRCA1-213ENST00000476777 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 RHOBTB2Q9BYZ6 727 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 FAM217BQ9NTX9 383 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-213ENST00000476777 FAM105AQ9NUU6 356 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 DLGAP2Q9P1A6 1054 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 CA14Q9ULX7 337 aa12.82□□□□□ -0.36
BRCA1-213ENST00000476777 A0A087WZ62 844 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 CCDC195A0A1B0GUA6 201 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 DDHD2O94830 711 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 DCNP07585 359 aaKnown RBP12.81□□□□□ -0.36
BRCA1-213ENST00000476777 SP9P0CG40 484 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 RFX1P22670 979 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 GBP2P32456 591 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-213ENST00000476777 CDC42EP1Q00587 391 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 ZC3H14Q6PJT7 736 aaKnown RBP12.81□□□□□ -0.36
BRCA1-213ENST00000476777 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 DCLK2Q8N568 766 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 RUBCNQ92622 972 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 STAMQ92783 540 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 MYADMQ96S97 322 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 HINFPQ9BQA5 517 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 FDXACB1Q9BRP7 624 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-213ENST00000476777 ZMYND12Q9H0C1 365 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 MAN1C1Q9NR34 630 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 MRPL17Q9NRX2 175 aaKnown RBP12.81□□□□□ -0.36
BRCA1-213ENST00000476777 PIN4Q9Y237 131 aaKnown RBP12.81□□□□□ -0.36
BRCA1-213ENST00000476777 CLUHO75153 1309 aa12.81□□□□□ -0.36
BRCA1-213ENST00000476777 IGKV6-21A0A0C4DH24 114 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 ESYT2A0FGR8 921 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 MSH4O15457 936 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 ZBTB43O43298 467 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 CDC27P30260 824 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 RAB27AP51159 221 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 AFF1P51825 1210 aaKnown RBP12.8□□□□□ -0.36
BRCA1-213ENST00000476777 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-213ENST00000476777 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms