RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TBX10O75333 385 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 EYA4O95677 639 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 ATP2B1P20020 1258 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 PPM1AP35813 382 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 PBX3P40426 434 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 RBM25P49756 843 aaKnown RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 RAB27AP51159 221 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 HMGN5P82970 282 aaKnown RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 KRT17Q04695 432 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 POU5F1BQ06416 359 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 SMAD2Q15796 467 aaKnown RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 MRPL10Q7Z7H8 261 aaKnown RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 SLC39A11Q8N1S5 342 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 RNF149Q8NC42 400 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 LPPQ93052 612 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 MTRQ99707 1265 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 MRPL9Q9BYD2 267 aaKnown RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
SEC13-214ENST00000476597 AGPAT5Q9NUQ2 364 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 SPG21Q9NZD8 308 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 PRKAG3Q9UGI9 489 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 CD207Q9UJ71 328 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 RALGAPA2Q2PPJ7 1873 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 C5orf42Q9H799 3197 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 OFD1O75665 1012 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 DGAT1O75907 488 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 SPATA31C1P0DKV0 1188 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 MCM7P33993 719 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 ARL2P36404 184 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 RARRES1P49788 294 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 NDUFV1P49821 464 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 PTENP60484 403 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 ZP2Q05996 745 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 COASYQ13057 564 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 ORC2Q13416 577 aaPredicted RBP12.03□□□□□ -0.48
SEC13-214ENST00000476597 SMAD4Q13485 552 aaKnown RBP12.03□□□□□ -0.48
SEC13-214ENST00000476597 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
SEC13-214ENST00000476597 PCBP1Q15365 356 aaKnown RBP eCLIP12.03□□□□□ -0.48
SEC13-214ENST00000476597 ZNF174Q15697 407 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 CLUL1Q15846 466 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 DUSP6Q16828 381 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 ADHFE1Q8IWW8 467 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 PIGOQ8TEQ8 1089 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 PGBD4Q96DM1 585 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
SEC13-214ENST00000476597 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
SEC13-214ENST00000476597 LOXHD1Q8IVV2 1947 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 A0A087WWV3 80 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 POTEMA6NI47 508 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 GLP2RO95838 553 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 COL9A1P20849 921 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
SEC13-214ENST00000476597 ALDH7A1P49419 539 aaKnown RBP12.02□□□□□ -0.49
SEC13-214ENST00000476597 BCAR1P56945 870 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 KCNC3Q14003 757 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 LONRF3Q496Y0 759 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 NOMO2Q5JPE7 1267 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 UBXN11Q5T124 520 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 GLB1LQ6UWU2 654 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 AGMOQ6ZNB7 445 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
SEC13-214ENST00000476597 NOSTRINQ8IVI9 506 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 C4orf32Q8N8J7 132 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 FAM184AQ8NB25 1140 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 VN1R2Q8NFZ6 395 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 TCF25Q9BQ70 676 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 NRDE2Q9H7Z3 1164 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 TUFT1Q9NNX1 390 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 TBC1D13Q9NVG8 400 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 TRIOO75962 3097 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
SEC13-214ENST00000476597 FSD2A1L4K1 749 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 HIDE1A8MVS5 230 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 NT5C1B-RDH14C9J2C7 533 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 GPR37L1O60883 481 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 MED24O75448 989 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 GALTP07902 379 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 OR52Z1P0C646 297 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 GLRA2P23416 452 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 AXLP30530 894 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 TECP42680 631 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 TRAPPC10P48553 1259 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 RBM10P98175 930 aaKnown RBP12.01□□□□□ -0.49
SEC13-214ENST00000476597 TFDP1Q14186 410 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 MRPL43Q8N983 215 aaKnown RBP12.01□□□□□ -0.49
SEC13-214ENST00000476597 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 NACC1Q96RE7 527 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 LRFN3Q9BTN0 628 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 POLR3CQ9BUI4 534 aaPredicted RBP12.01□□□□□ -0.49
SEC13-214ENST00000476597 NFKBIZQ9BYH8 718 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms