RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SSBP05455 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 TARBP2Q15633 366 aaKnown RBP18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 ZNF280BQ86YH2 543 aa18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 LENG9Q96B70 501 aa18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 FAM217BQ9NTX9 383 aaPredicted RBP18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 FAM105AQ9NUU6 356 aa18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 PIN4Q9Y237 131 aaKnown RBP18.55■□□□□ 0.56
APOBEC3F-203ENST00000476513 A0A087WZ62 844 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 SKIP12755 728 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 RFX1P22670 979 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 SFPQP23246 707 aaKnown RBP eCLIP18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 CDC27P30260 824 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 CIITAP33076 1130 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 CMASQ8NFW8 434 aaPredicted RBP18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 FDXACB1Q9BRP7 624 aaPredicted RBP18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 TBC1D17Q9HA65 648 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 CA14Q9ULX7 337 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 OTOGLQ3ZCN5 2332 aa18.54■□□□□ 0.56
APOBEC3F-203ENST00000476513 ESYT2A0FGR8 921 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 GOLGA8AA7E2F4 631 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 GOLGA8BA8MQT2 603 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 ZNF623O75123 536 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 GBP2P32456 591 aaPredicted RBP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 CDC42EP1Q00587 391 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 PUM1Q14671 1186 aaKnown RBP eCLIP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 NONOQ15233 471 aaKnown RBP eCLIP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 PFKFB3Q16875 520 aaPredicted RBP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 REXO1Q8N1G1 1221 aaKnown RBP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 SLC44A3Q8N4M1 653 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 TCEANC2Q96MN5 208 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 ZMYND12Q9H0C1 365 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 WDR6Q9NNW5 1121 aaKnown RBP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 MAN1C1Q9NR34 630 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 MRPL17Q9NRX2 175 aaKnown RBP18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 STK39Q9UEW8 545 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 CEP250Q9BV73 2442 aa18.53■□□□□ 0.56
APOBEC3F-203ENST00000476513 DDHD2O94830 711 aa18.52■□□□□ 0.56
APOBEC3F-203ENST00000476513 RAB27AP51159 221 aa18.52■□□□□ 0.56
APOBEC3F-203ENST00000476513 MYADMQ96S97 322 aa18.52■□□□□ 0.56
APOBEC3F-203ENST00000476513 CEP89Q96ST8 783 aa18.52■□□□□ 0.56
APOBEC3F-203ENST00000476513 EPS15L1Q9UBC2 864 aa18.52■□□□□ 0.56
APOBEC3F-203ENST00000476513 CLUHO75153 1309 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 IGKV6-21A0A0C4DH24 114 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 CCDC195A0A1B0GUA6 201 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 MSH4O15457 936 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 CHMP2AO43633 222 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 DCNP07585 359 aaKnown RBP18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 SP9P0CG40 484 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 SRFP11831 508 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 AFF1P51825 1210 aaKnown RBP18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 JAK3P52333 1124 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 EXOSC10Q01780 885 aaKnown RBP18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 MTERF2Q49AM1 385 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 SPECC1Q5M775 1068 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 AGMOQ6ZNB7 445 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 ZNF410Q86VK4 478 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 URGCPQ8TCY9 931 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 STAMQ92783 540 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 PGBD4Q96DM1 585 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 HINFPQ9BQA5 517 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 NIFKQ9BYG3 293 aaKnown RBP18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 RHOBTB2Q9BYZ6 727 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 UNC45AQ9H3U1 944 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 C6orf50Q9HD87 102 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 DLGAP2Q9P1A6 1054 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 FAN1Q9Y2M0 1017 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 C2orf16Q68DN1 1984 aa18.51■□□□□ 0.55
APOBEC3F-203ENST00000476513 CACNA1BQ00975 2339 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 KLF18A0A0U1RQI7 1052 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 TMEM150BA6NC51 233 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 C2CD2LO14523 706 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 INPPL1O15357 1258 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 EDIL3O43854 480 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 GAS7O60861 476 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 STBD1O95210 358 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 ALDH2P05091 517 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 SFNP31947 248 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 DNM2P50570 870 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 AK2P54819 239 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 PHLDB3Q6NSJ2 640 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 ZC3H14Q6PJT7 736 aaKnown RBP18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 CYP26C1Q6V0L0 522 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 CATSPER4Q7RTX7 472 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 RHPN2Q8IUC4 686 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 DCLK2Q8N568 766 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 GPR152Q8TDT2 470 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 RUBCNQ92622 972 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 NXPE3Q969Y0 559 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 RIT2Q99578 217 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 TMEM175Q9BSA9 504 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 ESYT1Q9BSJ8 1104 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 DLL3Q9NYJ7 618 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 SUCLA2Q9P2R7 463 aaPredicted RBP18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 SEPT9Q9UHD8 586 aaPredicted RBP18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 SIT1Q9Y3P8 196 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 PCDHB2Q9Y5E7 798 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 GPR179Q6PRD1 2367 aa18.5■□□□□ 0.55
APOBEC3F-203ENST00000476513 DNAH14Q0VDD8 3507 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 NRP1O14786 923 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms