RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ROPN1BQ9BZX4 212 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 ROPN1Q9HAT0 212 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 NMRK1Q9NWW6 199 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 SEC63Q9UGP8 760 aaKnown RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 CHMP2BQ9UQN3 213 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 USP20Q9Y2K6 914 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 NVLO15381 856 aaKnown RBP11.35□□□□□ -0.59
ABCF1-205ENST00000475993 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
ABCF1-205ENST00000475993 MTFR1Q15390 333 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 ZCWPW2Q504Y3 356 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 ALKBH5Q6P6C2 394 aaKnown RBP11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 JAMLQ86YT9 394 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 GLG1Q92896 1179 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PTPRN2Q92932 1015 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 SNX24Q9Y343 169 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 MYMKA6NI61 221 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 ECE2O60344 883 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 CLCN2P51788 898 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PLOD1Q02809 727 aaPredicted RBP11.35□□□□□ -0.59
ABCF1-205ENST00000475993 MAPK7Q13164 816 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 MAP7D1Q3KQU3 841 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 SLC15A3Q8IY34 581 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 SMC1BQ8NDV3 1235 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 UHMK1Q8TAS1 419 aaKnown RBP11.35□□□□□ -0.59
ABCF1-205ENST00000475993 NCSTNQ92542 709 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 GRAMD1AQ96CP6 724 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 TSG101Q99816 390 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 MYLK2Q9H1R3 596 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 GREM2Q9H772 168 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 DCLRE1BQ9H816 532 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PCDHA6Q9UN73 950 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 PCDHA8Q9Y5H6 950 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 GMEB1Q9Y692 573 aa11.35□□□□□ -0.59
ABCF1-205ENST00000475993 LMNAP02545 664 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 KCNA6P17658 529 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 FGFR2P21802 821 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 HOXA7P31268 230 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 FKBP3Q00688 224 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 OCRLQ01968 901 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 TMED1Q13445 227 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 DCAF12L1Q5VU92 463 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 DNAAF5Q86Y56 855 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ZBTB38Q8NAP3 1195 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 TTC8Q8TAM2 541 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 SNRNP27Q8WVK2 155 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ARHGEF2Q92974 986 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ABTB1Q969K4 478 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 TGS1Q96RS0 853 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 CRAMP1Q96RY5 1269 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 OXCT2Q9BYC2 517 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ERVK-5Q9HDB9 667 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 DIS3Q9Y2L1 958 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 USH1CQ9Y6N9 552 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 MEGF6O75095 1541 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ARAP2Q8WZ64 1704 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 HGSO14964 777 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 DDX3YO15523 660 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 NDUFB5O43674 189 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 FGRP09769 529 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 RARGP13631 454 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 CREB1P16220 341 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 FGFR4P22455 802 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 VHLP40337 213 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 CACNA2D1P54289 1103 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 SV2BQ7L1I2 683 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 GATA6Q92908 595 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 SLC7A6OSQ96CW6 309 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 TBC1D10AQ9BXI6 508 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 DENND2DQ9H6A0 471 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 RABL2BQ9UNT1 228 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 RGPD5Q99666 1765 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 H0Y3Z8 333 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 YARSP54577 528 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 CABP4P57796 275 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 RCN2Q14257 317 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 PUM3Q15397 648 aaKnown RBP11.34□□□□□ -0.59
ABCF1-205ENST00000475993 ZNF568Q3ZCX4 644 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 DAGLBQ8NCG7 672 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 FBXO41Q8TF61 875 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.597e-16■□□□□ 10.7
ABCF1-205ENST00000475993 VCX3BQ9H321 246 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 VCX3AQ9NNX9 186 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 BLOC1S4Q9NUP1 217 aa11.34□□□□□ -0.59
ABCF1-205ENST00000475993 USP40Q9NVE5 1235 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms