RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 GPC5P78333 572 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 PFKPQ01813 784 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 TRDNQ13061 729 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 UBXN2BQ14CS0 331 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 CCDC60Q8IWA6 550 aaPredicted RBP16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 CELF5Q8N6W0 485 aaKnown RBP16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 CLDN23Q96B33 292 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 ZNF707Q96C28 371 aaPredicted RBP16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 PLEKHA4Q9H4M7 779 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 LTB4R2Q9NPC1 389 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 ZDHHC7Q9NXF8 308 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 AKT3Q9Y243 479 aa16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.45■□□□□ 0.22
CSNK2B-207ENST00000475875 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 URODP06132 367 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 PROS1P07225 676 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 PHKA2P46019 1235 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 SLC11A1P49279 550 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 NRLP54845 237 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 RNASELQ05823 741 aaKnown RBP16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 SPEM2Q0P670 501 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 SNW1Q13573 536 aaKnown RBP16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 CEP55Q53EZ4 464 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 ZBTB41Q5SVQ8 909 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 LINC01465Q8N7H1 131 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 PHKBQ93100 1093 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 COL26A1Q96A83 441 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 RPS6KC1Q96S38 1066 aa16.44■□□□□ 0.22
CSNK2B-207ENST00000475875 SPEGQ15772 3267 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 CCNE2O96020 404 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 KIF5BP33176 963 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 SART3Q15020 963 aaKnown RBP16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 SLC44A4Q53GD3 710 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 MAMSTRQ6ZN01 415 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 GET4Q7L5D6 327 aaPredicted RBP16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 PIDD1Q9HB75 910 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 RXFP1Q9HBX9 757 aa16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 MAFBQ9Y5Q3 323 aaPredicted RBP16.43■□□□□ 0.22
CSNK2B-207ENST00000475875 MEIS1O00470 390 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 TEX28O15482 410 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 ZNF623O75123 536 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 RFPL2O75678 378 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 SOD2P04179 222 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 ATP4AP20648 1035 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 GNAQP50148 359 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 RAB27AP51159 221 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 GPC3P51654 580 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 CLCN3P51790 818 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 CSRP2Q16527 193 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 UBE2SQ16763 222 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 PRR23CQ6ZRP0 262 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 NIPA1Q7RTP0 329 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 CKAP2LQ8IYA6 745 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 RILPL2Q969X0 211 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 IER2Q9BTL4 223 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 MYL10Q9BUA6 226 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 LY9Q9HBG7 655 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 MTF2Q9Y483 593 aaPredicted RBP16.42■□□□□ 0.22
CSNK2B-207ENST00000475875 HIP1O00291 1037 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 OFD1O75665 1012 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 ALDH2P05091 517 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 HOXB3P14651 431 aaPredicted RBP16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 AK2P54819 239 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 CDC42EP1Q00587 391 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 PPP2R5DQ14738 602 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 SWSAP1Q6NVH7 229 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 URGCPQ8TCY9 931 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 FAM167AQ96KS9 214 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 PRKD2Q9BZL6 878 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 SEMA4GQ9NTN9 838 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 PCDHB15Q9Y5E8 787 aa16.41■□□□□ 0.22
CSNK2B-207ENST00000475875 DDAH1O94760 285 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 LIMK1P53667 647 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 GPR65Q8IYL9 337 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 FGF14Q92915 247 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 DIAPH3Q9NSV4 1193 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 CDH7Q9ULB5 785 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 INPP5FQ9Y2H2 1132 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 FAN1Q9Y2M0 1017 aa16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 MRPS17Q9Y2R5 130 aaKnown RBP16.4■□□□□ 0.22
CSNK2B-207ENST00000475875 SOBPA7XYQ1 873 aa16.39■□□□□ 0.21
CSNK2B-207ENST00000475875 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms