RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	CAPS	Q13938	189 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	GIT2	Q14161	759 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	PLEKHG4	Q58EX7	1191 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	CNKSR3	Q6P9H4	555 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.08	□□□□□ -0.64
DMD-223	ENST00000475732	ZNF365	Q70YC5	407 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	C16orf59	Q7L2K0	433 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	SRGAP1	Q7Z6B7	1085 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	DAW1	Q8N136	415 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	DBF4B	Q8NFT6	615 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	TMEM40	Q8WWA1	233 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	SEPT8	Q92599	483 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	DDX12P	Q92771	950 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	VWCE	Q96DN2	955 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
DMD-223	ENST00000475732	REEP2	Q9BRK0	252 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	NFKBIZ	Q9BYH8	718 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	OSBPL7	Q9BZF2	842 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	GOLPH3L	Q9H4A5	285 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	IFT122	Q9HBG6	1241 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	POLD4	Q9HCU8	107 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	KBTBD4	Q9NVX7	518 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	LARS	Q9P2J5	1176 aa	Known RBP	11.08	□□□□□ -0.64
DMD-223	ENST00000475732	SERTAD1	Q9UHV2	236 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	PADI3	Q9ULW8	664 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	NOC2L	Q9Y3T9	749 aa	Known RBP	11.08	□□□□□ -0.64
DMD-223	ENST00000475732	MYMK	A6NI61	221 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	LRRIQ4	A6NIV6	560 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	SFI1	A8K8P3	1242 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	ACTN4	O43707	911 aa	Known RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	TBCA	O75347	108 aa	Known RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	PRPF40A	O75400	957 aa	Known RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	FAM13A	O94988	1023 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	ZNF202	O95125	648 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	PLS3	P13797	630 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	HOXB1	P14653	301 aa	Predicted RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	SFPQ	P23246	707 aa	Known RBP eCLIP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	SMTN	P53814	917 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	PEX3	P56589	373 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	PTEN	P60484	403 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	NFX1	Q12986	1120 aa	Known RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	MAPK7	Q13164	816 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	DMP1	Q13316	513 aa	Predicted RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	IKBKE	Q14164	716 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	LONRF3	Q496Y0	759 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	TMEM240	Q5SV17	173 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	PRPF38B	Q5VTL8	546 aa	Known RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	DYM	Q7RTS9	669 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	ZBTB8OS	Q8IWT0	167 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	DEPTOR	Q8TB45	409 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	BSND	Q8WZ55	320 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	STAM	Q92783	540 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	FTHL17	Q9BXU8	183 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	C2orf40	Q9H1Z8	148 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	AGO3	Q9H9G7	860 aa	Known RBP	11.07	□□□□□ -0.64
DMD-223	ENST00000475732	ST3GAL5	Q9UNP4	418 aa		11.07	□□□□□ -0.64
DMD-223	ENST00000475732	CCDC169	A6NNP5	214 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	GOLGA6L22	H0YM25	854 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	INO80B-WBP1	J3KQ70	363 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	EFCAB14	O75071	495 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	GADD45B	O75293	160 aa	Predicted RBP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	CSDE1	O75534	798 aa	Known RBP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	BAIAP3	O94812	1187 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	AFM	P43652	599 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	NPTX2	P47972	431 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	ZNF131	P52739	623 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	UBE2H	P62256	183 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	FAM160A1	Q05DH4	1040 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	OTOP2	Q7RTS6	562 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	CATSPER4	Q7RTX7	472 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	FAM228A	Q86W67	206 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	MYCT1	Q8N699	235 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	CNNM3	Q8NE01	707 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	SPIRE2	Q8WWL2	714 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	DNAJC19	Q96DA6	116 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	CCDC34	Q96HJ3	373 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	NTPCR	Q9BSD7	190 aa	Known RBP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	TRIM9	Q9C026	710 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	MTIF3	Q9H2K0	278 aa	Known RBP	11.06	□□□□□ -0.64
DMD-223	ENST00000475732	ZHX3	Q9H4I2	956 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	MINDY3	Q9H8M7	445 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	PARVG	Q9HBI0	331 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	ERVK-5	Q9HDB9	667 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	KMT5A	Q9NQR1	393 aa		11.06	□□□□□ -0.64
DMD-223	ENST00000475732	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	ZBBX	A8MT70	800 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732		H0YCG3	227 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	TRAK2	O60296	914 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	ERLIN2	O94905	339 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	MYL1	P05976	194 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	IDE	P14735	1019 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	ZSCAN20	P17040	1043 aa	Predicted RBP	11.05	□□□□□ -0.64
DMD-223	ENST00000475732	GAP43	P17677	238 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	FGFR4	P22455	802 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	EFNA5	P52803	228 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	MBTD1	Q05BQ5	628 aa		11.05	□□□□□ -0.64
DMD-223	ENST00000475732	NCBP1	Q09161	790 aa	Known RBP	11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms