RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 UBASH3AP57075 661 aa19.86■□□□□ 0.77
ATG4B-217ENST00000475693 NBPF20Q3BBV1 942 aa19.86■□□□□ 0.77
ATG4B-217ENST00000475693 IER5Q5VY09 327 aa19.86■□□□□ 0.77
ATG4B-217ENST00000475693 NOC3LQ8WTT2 800 aaKnown RBP19.86■□□□□ 0.77
ATG4B-217ENST00000475693 PSPC1Q8WXF1 523 aaKnown RBP19.86■□□□□ 0.77
ATG4B-217ENST00000475693 MINDY3Q9H8M7 445 aa19.86■□□□□ 0.77
ATG4B-217ENST00000475693 HMX1Q9NP08 348 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-217ENST00000475693 AKT3Q9Y243 479 aa19.86■□□□□ 0.77
ATG4B-217ENST00000475693 NR2F2P24468 414 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 CYP2J2P51589 502 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 ARHGEF6Q15052 776 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 CCSAPQ6IQ19 270 aaPredicted RBP19.85■□□□□ 0.77
ATG4B-217ENST00000475693 NFRKBQ6P4R8 1299 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 RDH13Q8NBN7 331 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 KLHDC9Q8NEP7 349 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 DEPTORQ8TB45 409 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 SPIRE2Q8WWL2 714 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 CNOT6LQ96LI5 555 aaKnown RBP19.85■□□□□ 0.77
ATG4B-217ENST00000475693 TSG101Q99816 390 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 CBWD1Q9BRT8 395 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 GTPBP4Q9BZE4 634 aaKnown RBP19.85■□□□□ 0.77
ATG4B-217ENST00000475693 SPC25Q9HBM1 224 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 ARHGAP28Q9P2N2 729 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 GINS2Q9Y248 185 aa19.85■□□□□ 0.77
ATG4B-217ENST00000475693 LRRC63Q05C16 580 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 SLC39A4Q6P5W5 647 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 SARM1Q6SZW1 724 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 KIAA0319LQ8IZA0 1049 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 GBP3Q9H0R5 595 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 AGPAT3Q9NRZ7 376 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 TYW1Q9NV66 732 aaKnown RBP19.84■□□□□ 0.77
ATG4B-217ENST00000475693 TRAF3IP3Q9Y228 551 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 GRIN2DO15399 1336 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 PDXKO00764 312 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 NR3C1P04150 777 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 IQCF3P0C7M6 154 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 PPP1R2P41236 205 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 LBX1P52954 281 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 RTP1P59025 263 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 FAM47CQ5HY64 1035 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 CEP135Q66GS9 1140 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 LINC01465Q8N7H1 131 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 ZBTB45Q96K62 511 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-217ENST00000475693 C17orf75Q9HAS0 396 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 CDHR5Q9HBB8 845 aa19.84■□□□□ 0.77
ATG4B-217ENST00000475693 ADSSP30520 456 aa19.83■□□□□ 0.77
ATG4B-217ENST00000475693 NAMPTP43490 491 aa19.83■□□□□ 0.77
ATG4B-217ENST00000475693 FKBP3Q00688 224 aaKnown RBP19.83■□□□□ 0.77
ATG4B-217ENST00000475693 CDR2LQ86X02 465 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-217ENST00000475693 C7orf31Q8N865 590 aa19.83■□□□□ 0.77
ATG4B-217ENST00000475693 VTI1AQ96AJ9 217 aa19.83■□□□□ 0.77
ATG4B-217ENST00000475693 ACCSQ96QU6 501 aa19.83■□□□□ 0.77
ATG4B-217ENST00000475693 THAP9Q9H5L6 903 aa19.83■□□□□ 0.77
ATG4B-217ENST00000475693 A0A087WZ62 844 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 PES1O00541 588 aaKnown RBP19.83■□□□□ 0.76
ATG4B-217ENST00000475693 AKAP3O75969 853 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 KIF20AO95235 890 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 DNTTIP2Q5QJE6 756 aaKnown RBP19.83■□□□□ 0.76
ATG4B-217ENST00000475693 RETREG2Q8NC44 543 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 DNAJB3Q8WWF6 145 aa19.83■□□□□ 0.76
ATG4B-217ENST00000475693 FDXACB1Q9BRP7 624 aaPredicted RBP19.83■□□□□ 0.76
ATG4B-217ENST00000475693 MTG1Q9BT17 334 aaPredicted RBP19.83■□□□□ 0.76
ATG4B-217ENST00000475693 GOLGA6L6A8MZA4 724 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 FGFR4P22455 802 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 KIZQ2M2Z5 673 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 SLC9C1Q4G0N8 1177 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 TCP11Q8WWU5 503 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 ST6GALNAC4Q9H4F1 302 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 IFT122Q9HBG6 1241 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 NRCAMQ92823 1304 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 K7ERI5 159 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 CALUO43852 315 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-217ENST00000475693 HSPA8P11142 646 aaKnown RBP19.82■□□□□ 0.76
ATG4B-217ENST00000475693 DNM2P50570 870 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 ADAM17P78536 824 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 GDF6Q6KF10 455 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-217ENST00000475693 STXBP4Q6ZWJ1 553 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 MAP4K3Q8IVH8 894 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 CCDC155Q8N6L0 562 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 WNT8BQ93098 351 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 BICD1Q96G01 975 aa19.82■□□□□ 0.76
ATG4B-217ENST00000475693 TARS2Q9BW92 718 aaKnown RBP19.82■□□□□ 0.76
ATG4B-217ENST00000475693 MAGEB2O15479 319 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 B4GALT5O43286 388 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 CYP2C9P11712 490 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 MTIF2P46199 727 aaKnown RBP19.81■□□□□ 0.76
ATG4B-217ENST00000475693 COPB1P53618 953 aaKnown RBP19.81■□□□□ 0.76
ATG4B-217ENST00000475693 PRMT2P55345 433 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 NLRP11P59045 1033 aaKnown RBP19.81■□□□□ 0.76
ATG4B-217ENST00000475693 DRC7Q8IY82 874 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 SAAL1Q96ER3 474 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 TUBGCP2Q9BSJ2 902 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 HAPLN2Q9GZV7 340 aa19.81■□□□□ 0.76
ATG4B-217ENST00000475693 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.81■□□□□ 0.763e-6■□□□□ 8.5
ATG4B-217ENST00000475693 LIMA1Q9UHB6 759 aaKnown RBP19.81■□□□□ 0.76
ATG4B-217ENST00000475693 C17orf102A2RUQ5 167 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 MXD4Q14582 209 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-217ENST00000475693 KIAA1524Q8TCG1 905 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms