RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PNMA3Q9UL41 463 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 SYNGAP1Q96PV0 1343 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 IGSF9BQ9UPX0 1349 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 PDXKO00764 312 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 LINGO3P0C6S8 592 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 ALAS1P13196 640 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 CTNNA2P26232 953 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 BIRC2Q13490 618 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 TRAPPC3LQ5T215 181 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 AP1ARQ63HQ0 302 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 NUGGCQ68CJ6 796 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 UHMK1Q8TAS1 419 aaKnown RBP19.12■□□□□ 0.65
CCM2-207ENST00000475551 ALG3Q92685 438 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 COA7Q96BR5 231 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 NAF1Q96HR8 494 aaKnown RBP19.12■□□□□ 0.65
CCM2-207ENST00000475551 EYA3Q99504 573 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 UBA5Q9GZZ9 404 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 ZFATQ9P243 1243 aa19.12■□□□□ 0.65
CCM2-207ENST00000475551 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
CCM2-207ENST00000475551 SLC16A3O15427 465 aaKnown RBP19.11■□□□□ 0.65
CCM2-207ENST00000475551 AKAP3O75969 853 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 SOX5P35711 763 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 TNNI2P48788 182 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 CASP5P51878 434 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 LMNB2Q03252 620 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 LRRC14Q15048 493 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 CCDC38Q502W7 563 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 ARSHQ5FYA8 562 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 GJB7Q6PEY0 223 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 GLYCTKQ8IVS8 523 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 PRELID2Q8N945 189 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 CKAP2Q8WWK9 683 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 SLC35C1Q96A29 364 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 SYT11Q9BT88 431 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 SNED1Q8TER0 1413 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 MARCH6O60337 910 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 CCDC15Q0P6D6 951 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 MKRN3Q13064 507 aaKnown RBP19.11■□□□□ 0.65
CCM2-207ENST00000475551 TAF11Q15544 211 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 ZNF568Q3ZCX4 644 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 RNF43Q68DV7 783 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 EPM2AIP1Q7L775 607 aaPredicted RBP19.11■□□□□ 0.65
CCM2-207ENST00000475551 ART4Q93070 314 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 SERPINB12Q96P63 405 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 RAB3IPQ96QF0 476 aaPredicted RBP19.11■□□□□ 0.65
CCM2-207ENST00000475551 TAOK3Q9H2K8 898 aa19.11■□□□□ 0.65
CCM2-207ENST00000475551 TMEM120BA0PK00 339 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 GGPS1O95749 300 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 KRT18P05783 430 aaKnown RBP19.1■□□□□ 0.65
CCM2-207ENST00000475551 ATP5DP30049 168 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 SLC12A3P55017 1021 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 VSTM1Q6UX27 236 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 TRMT10CQ7L0Y3 403 aaKnown RBP19.1■□□□□ 0.65
CCM2-207ENST00000475551 CELF1Q92879 486 aaKnown RBP19.1■□□□□ 0.65
CCM2-207ENST00000475551 ARHGEF2Q92974 986 aaKnown RBP19.1■□□□□ 0.65
CCM2-207ENST00000475551 LRRC42Q9Y546 428 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 MIF4GDA9UHW6 222 aaKnown RBP19.1■□□□□ 0.65
CCM2-207ENST00000475551 FESP07332 822 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 ABCB4P21439 1286 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 HOXD13P35453 343 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 HADHBP55084 474 aaKnown RBP19.1■□□□□ 0.65
CCM2-207ENST00000475551 TCERG1LQ5VWI1 586 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 PPP1R18Q6NYC8 613 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 CYFIP1Q7L576 1253 aa19.1■□□□□ 0.65
CCM2-207ENST00000475551 POTEB3A0JP26 581 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 ENO4A6NNW6 628 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 USP17L5A8MUK1 530 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 POTECB2RU33 542 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 E7ENQ6 273 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 AHCYL1O43865 530 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 UNC5CO95185 931 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 GNAZP19086 355 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 RPL13P26373 211 aaKnown RBP19.09■□□□□ 0.65
CCM2-207ENST00000475551 RFC4P35249 363 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 NOVP48745 357 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 CLK2P49760 499 aaKnown RBP19.09■□□□□ 0.65
CCM2-207ENST00000475551 PPP4CP60510 307 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 POTEBQ6S5H4 581 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 SPDYE1Q8NFV5 336 aaPredicted RBP19.09■□□□□ 0.65
CCM2-207ENST00000475551 MGARPQ8TDB4 240 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 TGFBRAP1Q8WUH2 860 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 GJA10Q969M2 543 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 ARHGEF26Q96DR7 871 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 STK33Q9BYT3 514 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 DHX36Q9H2U1 1008 aaKnown RBP19.09■□□□□ 0.65
CCM2-207ENST00000475551 ZHX3Q9H4I2 956 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 HIP1RO75146 1068 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 BAG3O95817 575 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 HMGB2P26583 209 aaKnown RBP19.09■□□□□ 0.65
CCM2-207ENST00000475551 CDK8P49336 464 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 ACVR2BQ13705 512 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 CMPK2Q5EBM0 449 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 TTC27Q6P3X3 843 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 C16orf86Q6ZW13 317 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 DHX37Q8IY37 1157 aaKnown RBP19.09■□□□□ 0.65
CCM2-207ENST00000475551 OSBPL1AQ9BXW6 950 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 YIPF3Q9GZM5 350 aa19.09■□□□□ 0.65
CCM2-207ENST00000475551 TYW1Q9NV66 732 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms