RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 C1QTNF3Q9BXJ4 246 aa8.87□□□□□ -0.99
SMC5-203ENST00000475540 PLA2G3Q9NZ20 509 aa8.87□□□□□ -0.99
SMC5-203ENST00000475540 PRSS50Q9UI38 385 aa8.87□□□□□ -0.99
SMC5-203ENST00000475540 TMPRSS11EQ9UL52 423 aa8.87□□□□□ -0.99
SMC5-203ENST00000475540 SLC30A1Q9Y6M5 507 aa8.87□□□□□ -0.99
SMC5-203ENST00000475540 GOLGA8AA7E2F4 631 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 GPR39O43194 453 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 TOX4O94842 621 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 VSIG10L2P0DP72 767 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 ZNF20P17024 532 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 CD69Q07108 199 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 PPARAQ07869 468 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 UGT8Q16880 541 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 LMBR1LQ6UX01 489 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 OR14C36Q8NHC7 312 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 AGO3Q9H9G7 860 aaKnown RBP8.86□□□□□ -0.99
SMC5-203ENST00000475540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMC5-203ENST00000475540 MCM8Q9UJA3 840 aa8.86□□□□□ -0.99
SMC5-203ENST00000475540 GAAP10253 952 aa8.85□□□□□ -0.99
SMC5-203ENST00000475540 SELENOPP49908 381 aa8.85□□□□□ -0.99
SMC5-203ENST00000475540 FSCN1Q16658 493 aaKnown RBP8.85□□□□□ -0.99
SMC5-203ENST00000475540 PITRM1Q5JRX3 1037 aa8.85□□□□□ -0.99
SMC5-203ENST00000475540 SPATS2Q86XZ4 545 aaKnown RBP8.85□□□□□ -0.99
SMC5-203ENST00000475540 EAF2Q96CJ1 260 aaPredicted RBP8.85□□□□□ -0.99
SMC5-203ENST00000475540 TMEM176AQ96HP8 235 aa8.85□□□□□ -0.99
SMC5-203ENST00000475540 GPHA2Q96T91 129 aa8.85□□□□□ -0.99
SMC5-203ENST00000475540 RCAN3Q9UKA8 241 aa8.85□□□□□ -0.99
SMC5-203ENST00000475540 LPLP06858 475 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 MSX2P35548 267 aaPredicted RBP8.84□□□□□ -0.99
SMC5-203ENST00000475540 LGALS4P56470 323 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 HHEXQ03014 270 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 FOXL1Q12952 345 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 SAFB2Q14151 953 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMC5-203ENST00000475540 LHFPL2Q6ZUX7 228 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 UNC5BQ8IZJ1 945 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 FAM89AQ96GI7 184 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 NCDNQ9UBB6 729 aa8.84□□□□□ -0.99
SMC5-203ENST00000475540 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
SMC5-203ENST00000475540 LY86O95711 162 aa8.83□□□□□ -1
SMC5-203ENST00000475540 MGAT5Q09328 741 aa8.83□□□□□ -1
SMC5-203ENST00000475540 TRIM25Q14258 630 aaKnown RBP8.83□□□□□ -1
SMC5-203ENST00000475540 ZNF662Q6ZS27 426 aa8.83□□□□□ -1
SMC5-203ENST00000475540 GAREM2Q75VX8 874 aa8.83□□□□□ -1
SMC5-203ENST00000475540 ADGRE4PQ86SQ3 457 aa8.83□□□□□ -1
SMC5-203ENST00000475540 LYSMD2Q8IV50 215 aa8.83□□□□□ -1
SMC5-203ENST00000475540 GLB1L2Q8IW92 636 aa8.83□□□□□ -1
SMC5-203ENST00000475540 AHCYL2Q96HN2 611 aaKnown RBP8.83□□□□□ -1
SMC5-203ENST00000475540 RAX2Q96IS3 184 aa8.83□□□□□ -1
SMC5-203ENST00000475540 ADOQ96SZ5 270 aa8.83□□□□□ -1
SMC5-203ENST00000475540 FAM126AQ9BYI3 521 aaPredicted RBP8.83□□□□□ -1
SMC5-203ENST00000475540 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
SMC5-203ENST00000475540 KCTD10Q9H3F6 313 aa8.83□□□□□ -1
SMC5-203ENST00000475540 VTA1Q9NP79 307 aa8.83□□□□□ -1
SMC5-203ENST00000475540 JAG2Q9Y219 1238 aa8.83□□□□□ -1
SMC5-203ENST00000475540 UBE2QL1A1L167 161 aa8.82□□□□□ -1
SMC5-203ENST00000475540 MUSKO15146 869 aa8.82□□□□□ -1
SMC5-203ENST00000475540 POU3F3P20264 500 aaPredicted RBP8.82□□□□□ -1
SMC5-203ENST00000475540 ACO1P21399 889 aaKnown RBP8.82□□□□□ -1
SMC5-203ENST00000475540 ENPP1P22413 925 aa8.82□□□□□ -1
SMC5-203ENST00000475540 SCAND1P57086 179 aa8.82□□□□□ -1
SMC5-203ENST00000475540 ADAM8P78325 824 aa8.82□□□□□ -1
SMC5-203ENST00000475540 SPIDRQ14159 915 aa8.82□□□□□ -1
SMC5-203ENST00000475540 PRKD1Q15139 912 aaPredicted RBP8.82□□□□□ -1
SMC5-203ENST00000475540 DDX42Q86XP3 938 aaKnown RBP eCLIP8.82□□□□□ -1
SMC5-203ENST00000475540 SLC41A1Q8IVJ1 513 aa8.82□□□□□ -1
SMC5-203ENST00000475540 CMTM4Q8IZR5 234 aa8.82□□□□□ -1
SMC5-203ENST00000475540 D2HGDHQ8N465 521 aa8.82□□□□□ -1
SMC5-203ENST00000475540 LMBR1Q8WVP7 490 aa8.82□□□□□ -1
SMC5-203ENST00000475540 EDAQ92838 391 aa8.82□□□□□ -1
SMC5-203ENST00000475540 BORCS6Q96GS4 357 aa8.82□□□□□ -1
SMC5-203ENST00000475540 MPHOSPH9Q99550 1183 aa8.82□□□□□ -1
SMC5-203ENST00000475540 TCF25Q9BQ70 676 aa8.82□□□□□ -1
SMC5-203ENST00000475540 FDXACB1Q9BRP7 624 aaPredicted RBP8.82□□□□□ -1
SMC5-203ENST00000475540 IL23AQ9NPF7 189 aa8.82□□□□□ -1
SMC5-203ENST00000475540 EVLQ9UI08 416 aaPredicted RBP8.82□□□□□ -1
SMC5-203ENST00000475540 TSC22D4Q9Y3Q8 395 aa8.82□□□□□ -1
SMC5-203ENST00000475540 MTSS1O43312 755 aa8.81□□□□□ -1
SMC5-203ENST00000475540 ALDH1A2O94788 518 aa8.81□□□□□ -1
SMC5-203ENST00000475540 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.81□□□□□ -1
SMC5-203ENST00000475540 Q6ZSN1 163 aa8.81□□□□□ -1
SMC5-203ENST00000475540 SGMS1Q86VZ5 419 aa8.81□□□□□ -1
SMC5-203ENST00000475540 PALM2Q8IXS6 379 aa8.81□□□□□ -1
SMC5-203ENST00000475540 CMIPQ8IY22 773 aa8.81□□□□□ -1
SMC5-203ENST00000475540 PIK3C3Q8NEB9 887 aa8.81□□□□□ -1
SMC5-203ENST00000475540 PRDM12Q9H4Q4 367 aa8.81□□□□□ -1
SMC5-203ENST00000475540 ING3Q9NXR8 418 aa8.81□□□□□ -1
SMC5-203ENST00000475540 EDARQ9UNE0 448 aa8.81□□□□□ -1
SMC5-203ENST00000475540 ATP8A1Q9Y2Q0 1164 aa8.81□□□□□ -1
SMC5-203ENST00000475540 TESMINQ9Y4I5 508 aa8.81□□□□□ -1
SMC5-203ENST00000475540 CDY2AQ9Y6F7 541 aa8.81□□□□□ -1
SMC5-203ENST00000475540 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
SMC5-203ENST00000475540 PRKD3O94806 890 aa8.8□□□□□ -1
SMC5-203ENST00000475540 NPEPPSP55786 919 aa8.8□□□□□ -1
SMC5-203ENST00000475540 FAM111BQ6SJ93 734 aa8.8□□□□□ -1
SMC5-203ENST00000475540 MAMDC4Q6UXC1 1216 aa8.8□□□□□ -1
SMC5-203ENST00000475540 TAS1R1Q7RTX1 841 aa8.8□□□□□ -1
SMC5-203ENST00000475540 C14orf119Q9NWQ9 140 aa8.8□□□□□ -1
SMC5-203ENST00000475540 C1QTNF3-AMACRE9PGA6 284 aa8.79□□□□□ -1
SMC5-203ENST00000475540 INSRRP14616 1297 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms