RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 JUNP05412 331 aaKnown RBP6.59□□□□□ -1.35
LTN1-204ENST00000475344 ACVRL1P37023 503 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 KIR2DL3P43628 341 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 MAN2A1Q16706 1144 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 FKBP15Q5T1M5 1219 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 KIAA0907Q7Z7F0 614 aaPredicted RBP6.59□□□□□ -1.35
LTN1-204ENST00000475344 GSPT2Q8IYD1 628 aaKnown RBP6.59□□□□□ -1.35
LTN1-204ENST00000475344 ANKRD35Q8N283 1001 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 MB21D1Q8N884 522 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 CDYL2Q8N8U2 506 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 EPC1Q9H2F5 836 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 ING3Q9NXR8 418 aa6.59□□□□□ -1.35
LTN1-204ENST00000475344 A0A0A6YYK5 440 aaPredicted RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 CYR61O00622 381 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 SLPIP03973 132 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 XPAP23025 273 aaPredicted RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 LSSP48449 732 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 HMGA2P52926 109 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 NPEPPSP55786 919 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 KLF10Q13118 480 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 CNGB1Q14028 1251 aaPredicted RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 RRP1BQ14684 758 aaKnown RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 DDB1Q16531 1140 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 IGFL4Q6B9Z1 124 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 Q6ZRM9 215 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 ELOA2Q8IYF1 753 aaPredicted RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 CMTM4Q8IZR5 234 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 PGBD4Q96DM1 585 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 SORCS2Q96PQ0 1159 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 ANO3Q9BYT9 981 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 EMC7Q9NPA0 242 aa6.58□□□□□ -1.36
LTN1-204ENST00000475344 USP36Q9P275 1121 aaKnown RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 ING1Q9UK53 422 aaPredicted RBP6.58□□□□□ -1.36
LTN1-204ENST00000475344 PRSS38A1L453 326 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 GSG1L2A8MUP6 293 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 ENPP3O14638 875 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 CLEC2LP0C7M8 214 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 GAAP10253 952 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 CD69Q07108 199 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 TERF2Q15554 542 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 NOP9Q86U38 636 aaKnown RBP6.57□□□□□ -1.36
LTN1-204ENST00000475344 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 USP7Q93009 1102 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 MRIQ9BWK5 157 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 OSBPL6Q9BZF3 934 aa6.57□□□□□ -1.36
LTN1-204ENST00000475344 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
LTN1-204ENST00000475344 A0A087X0B3 334 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 KDM1AO60341 852 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 SCNN1GP51170 649 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 GYS2P54840 703 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 PPARAQ07869 468 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 ABHD18Q0P651 414 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 TUBA3CQ13748 450 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 ATP13A4Q4VNC1 1196 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 TAF7LQ5H9L4 462 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 GPR158Q5T848 1215 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 BROXQ5VW32 411 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 TUBA3EQ6PEY2 450 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 CXorf67Q86X51 503 aaPredicted RBP6.56□□□□□ -1.36
LTN1-204ENST00000475344 ATXN2LQ8WWM7 1075 aaKnown RBP6.56□□□□□ -1.36
LTN1-204ENST00000475344 GAB3Q8WWW8 586 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 ZNF512Q96ME7 567 aaPredicted RBP6.56□□□□□ -1.36
LTN1-204ENST00000475344 GPR87Q9BY21 358 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.56□□□□□ -1.36
LTN1-204ENST00000475344 AURKAIP1Q9NWT8 199 aaPredicted RBP6.56□□□□□ -1.36
LTN1-204ENST00000475344 KCNG1Q9UIX4 513 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 NOC2LQ9Y3T9 749 aaKnown RBP6.56□□□□□ -1.36
LTN1-204ENST00000475344 PPP2R3BQ9Y5P8 575 aa6.56□□□□□ -1.36
LTN1-204ENST00000475344 MFAP3LO75121 409 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 STC2O76061 302 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 ALDH1A2O94788 518 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 PFKMP08237 780 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 MAN2A2P49641 1150 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 PHC1P78364 1004 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 MGAT5Q09328 741 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 SPIDRQ14159 915 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 FHL2Q14192 279 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 CCDC62Q6P9F0 684 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 LMBR1LQ6UX01 489 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 FRMD7Q6ZUT3 714 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 TMPRSS6Q8IU80 811 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 UBR7Q8N806 425 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 OR5M3Q8NGP4 307 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 CACTINQ8WUQ7 758 aaKnown RBP6.55□□□□□ -1.36
LTN1-204ENST00000475344 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 PCED1AQ9H1Q7 454 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 PARPBPQ9NWS1 579 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 TBX22Q9Y458 520 aa6.55□□□□□ -1.36
LTN1-204ENST00000475344 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
LTN1-204ENST00000475344 LY86O95711 162 aa6.54□□□□□ -1.36
LTN1-204ENST00000475344 GNAT2P19087 354 aa6.54□□□□□ -1.36
LTN1-204ENST00000475344 MCM7P33993 719 aa6.54□□□□□ -1.36
LTN1-204ENST00000475344 FAM214AQ32MH5 1076 aa6.54□□□□□ -1.36
LTN1-204ENST00000475344 MFSD5Q6N075 450 aa6.54□□□□□ -1.36
LTN1-204ENST00000475344 HDGFL2Q7Z4V5 671 aaPredicted RBP6.54□□□□□ -1.36
LTN1-204ENST00000475344 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
LTN1-204ENST00000475344 CEP72Q9P209 647 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms