RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 AGPAT5Q9NUQ2 364 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 PIN4Q9Y237 131 aaKnown RBP17.97■□□□□ 0.47
SRM-204ENST00000475189 PCDHB7Q9Y5E2 793 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 CHD7Q9P2D1 2997 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 RALGAPA2Q2PPJ7 1873 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 LRRIQ4A6NIV6 560 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 INO80B-WBP1J3KQ70 363 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 HIP1RO75146 1068 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
SRM-204ENST00000475189 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.47
SRM-204ENST00000475189 AMHR2Q16671 573 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 CDCA2Q69YH5 1023 aaPredicted RBP17.96■□□□□ 0.47
SRM-204ENST00000475189 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 RASSF8Q8NHQ8 419 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 PRDM12Q9H4Q4 367 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
SRM-204ENST00000475189 TMEM161AQ9NX61 479 aa17.96■□□□□ 0.47
SRM-204ENST00000475189 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.46
SRM-204ENST00000475189 CDH23Q9H251 3354 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 A0A0U1RQF3 1178 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 GUCY2CP25092 1073 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 NAMPTP43490 491 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 GATMP50440 423 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 ERVK-21P61565 698 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 MAPK7Q13164 816 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 MCM6Q14566 821 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 PPP2R5AQ15172 486 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 PCBP1Q15365 356 aaKnown RBP eCLIP17.95■□□□□ 0.464e-6■□□□□ 10.3
SRM-204ENST00000475189 ARSHQ5FYA8 562 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 TWF2Q6IBS0 349 aaKnown RBP17.95■□□□□ 0.46
SRM-204ENST00000475189 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
SRM-204ENST00000475189 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 RAD54LQ92698 747 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 IFT74Q96LB3 600 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 TGS1Q96RS0 853 aaKnown RBP17.95■□□□□ 0.46
SRM-204ENST00000475189 TIPINQ9BVW5 301 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 TRAIPQ9BWF2 469 aa17.95■□□□□ 0.46
SRM-204ENST00000475189 EPOPA6NHQ4 379 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 TSPAN1O60635 241 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 ERLIN2O94905 339 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 ATF7P17544 494 aaPredicted RBP17.94■□□□□ 0.46
SRM-204ENST00000475189 AXLP30530 894 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 RAD51AP2Q09MP3 1159 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 CMTR2Q8IYT2 770 aaKnown RBP17.94■□□□□ 0.46
SRM-204ENST00000475189 FIBCD1Q8N539 461 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 ARNTL2Q8WYA1 636 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 C17orf80Q9BSJ5 609 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 KCND2Q9NZV8 630 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 CFAP45Q9UL16 551 aa17.94■□□□□ 0.46
SRM-204ENST00000475189 NPHP3-ACAD11A0A0J9YXS1 232 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 RFXAPO00287 272 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 CUTAO60888 179 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 EOMESO95936 686 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 LINC00271P0C7V0 271 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 FGFR1P11362 822 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 DDIT3P35638 169 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 TXLNAP40222 546 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 BTG3Q14201 252 aaPredicted RBP17.93■□□□□ 0.46
SRM-204ENST00000475189 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
SRM-204ENST00000475189 PAN2Q504Q3 1202 aaKnown RBP17.93■□□□□ 0.46
SRM-204ENST00000475189 UBXN11Q5T124 520 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 AXDND1Q5T1B0 1012 aaPredicted RBP17.93■□□□□ 0.46
SRM-204ENST00000475189 DEPTORQ8TB45 409 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 KCNG4Q8TDN1 519 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 LARP4BQ92615 738 aaKnown RBP17.93■□□□□ 0.46
SRM-204ENST00000475189 CPB2Q96IY4 423 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 CHAMP1Q96JM3 812 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 DRC1Q96MC2 740 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 C2orf40Q9H1Z8 148 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 FZD8Q9H461 694 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 FAM105AQ9NUU6 356 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 RCOR1Q9UKL0 485 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 MTUS1Q9ULD2 1270 aa17.93■□□□□ 0.46
SRM-204ENST00000475189 COL4A4P53420 1690 aaPredicted RBP17.93■□□□□ 0.46
SRM-204ENST00000475189 A0A087X0B3 334 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 SFI1A8K8P3 1242 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 B4GALT5O43286 388 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 ZNF623O75123 536 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 SKIP12755 728 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 ARF4P18085 180 aaPredicted RBP17.92■□□□□ 0.46
SRM-204ENST00000475189 NPTX2P47972 431 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 PEX3P56589 373 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 ADGRE1Q14246 886 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 FAM187BQ17R55 369 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 RRAGBQ5VZM2 374 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 RNF169Q8NCN4 708 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 CLP1Q92989 425 aaKnown RBP17.92■□□□□ 0.46
SRM-204ENST00000475189 PRIMPOLQ96LW4 560 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 KIFC3Q9BVG8 833 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 PANK2Q9BZ23 570 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 CCDC113Q9H0I3 377 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 C17orf75Q9HAS0 396 aa17.92■□□□□ 0.46
SRM-204ENST00000475189 PRMT7Q9NVM4 692 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms