RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 PLAGL2Q9UPG8 496 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 TNFRSF10AO00220 468 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 HOXA2O43364 376 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 SLITRK3O94933 977 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 ITGB1P05556 798 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 SRGAP2CP0DJJ0 459 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 FAM189BP81408 668 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 EMC2Q15006 297 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 ZNF174Q15697 407 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 NAALADL2Q58DX5 795 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 TWF2Q6IBS0 349 aaKnown RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 ECHDC2Q86YB7 292 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 FBXO18Q8NFZ0 1043 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 PRPF31Q8WWY3 499 aaKnown RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 MTMR9Q96QG7 549 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 DHX33Q9H6R0 707 aaKnown RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 TYW1Q9NV66 732 aaKnown RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 HCSTQ9UBK5 93 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 PIN4Q9Y237 131 aaKnown RBP10.52□□□□□ -0.73
PDPN-204ENST00000475043 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
PDPN-204ENST00000475043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.51□□□□□ -0.73
PDPN-204ENST00000475043 A0A0U1RQF3 1178 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
PDPN-204ENST00000475043 TECP42680 631 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 LAMTOR4Q0VGL1 99 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 NOSTRINQ8IVI9 506 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 THNSL1Q8IYQ7 743 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 SPPL3Q8TCT6 385 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 NEK9Q8TD19 979 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 MICAL1Q8TDZ2 1067 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 PIGOQ8TEQ8 1089 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 POF1BQ8WVV4 589 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 TCP11Q8WWU5 503 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 MTRQ99707 1265 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 HSD17B14Q9BPX1 270 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 TMEM117Q9H0C3 514 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 TMEM60Q9H2L4 133 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 IGFLR1Q9H665 355 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 CHST12Q9NRB3 414 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 NOL7Q9UMY1 257 aaKnown RBP10.51□□□□□ -0.73
PDPN-204ENST00000475043 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
PDPN-204ENST00000475043 A0A087WWV3 80 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
PDPN-204ENST00000475043 EOMESO95936 686 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 LAG3P18627 525 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 DNAJB1P25685 340 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 TTC38Q5R3I4 469 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 LRRC43Q8N309 656 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 COLGALT1Q8NBJ5 622 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 RNF149Q8NC42 400 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 HELQQ8TDG4 1101 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 PPP2R3CQ969Q6 453 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 PABPC5Q96DU9 382 aaKnown RBP10.5□□□□□ -0.73
PDPN-204ENST00000475043 CASD1Q96PB1 797 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 SLC4A5Q9BY07 1137 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 CWH43Q9H720 699 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 IFT122Q9HBG6 1241 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 ANKEF1Q9NU02 776 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
PDPN-204ENST00000475043 ASAP2O43150 1006 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 NCK2O43639 380 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 USO1O60763 962 aaKnown RBP10.49□□□□□ -0.73
PDPN-204ENST00000475043 DGAT1O75907 488 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 FGF18O76093 207 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 ERLIN2O94905 339 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 LYPLA2O95372 231 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 SKIP12755 728 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDPN-204ENST00000475043 IRS1P35568 1242 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 PBX3P40426 434 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 PHKA2P46019 1235 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 RARRES1P49788 294 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 HYAL1Q12794 435 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 ORC2Q13416 577 aaPredicted RBP10.49□□□□□ -0.73
PDPN-204ENST00000475043 CAMK1Q14012 370 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 TFDP1Q14186 410 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 MXD4Q14582 209 aaPredicted RBP10.49□□□□□ -0.73
PDPN-204ENST00000475043 NBR1Q14596 966 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 CSPP1Q1MSJ5 1256 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 LEXMQ3ZCV2 418 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 CLLU1OSQ5K130 101 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 MCTP1Q6DN14 999 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
PDPN-204ENST00000475043 LRRC55Q6ZSA7 311 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 MAEAQ7L5Y9 396 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 SRGAP1Q7Z6B7 1085 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 RBM23Q86U06 439 aaKnown RBP10.49□□□□□ -0.73
PDPN-204ENST00000475043 FERMT3Q86UX7 667 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.49□□□□□ -0.73
PDPN-204ENST00000475043 ERMNQ8TAM6 284 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 LPPQ93052 612 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms