RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 RETREG2Q8NC44 543 aa22.37■■□□□ 1.17
CDHR3-210ENST00000474330 DPF3Q92784 378 aa22.37■■□□□ 1.17
CDHR3-210ENST00000474330 EEF2KMTQ96G04 330 aa22.37■■□□□ 1.17
CDHR3-210ENST00000474330 ARHGAP28Q9P2N2 729 aa22.37■■□□□ 1.17
CDHR3-210ENST00000474330 RANBP2P49792 3224 aaKnown RBP22.37■■□□□ 1.17
CDHR3-210ENST00000474330 ADGRA3Q8IWK6 1321 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 A0A1B0GTH6 734 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 DENND3A2RUS2 1198 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 ADAMTS4O75173 837 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 KLRC1P26715 233 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 PPFIA1Q13136 1202 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 ADAM9Q13443 819 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 DRP2Q13474 957 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 MXD4Q14582 209 aaPredicted RBP22.36■■□□□ 1.17
CDHR3-210ENST00000474330 EFCAB12Q6NXP0 572 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 HS2ST1Q7LGA3 356 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 GOLGA5Q8TBA6 731 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 PRPF31Q8WWY3 499 aaKnown RBP22.36■■□□□ 1.17
CDHR3-210ENST00000474330 PSPC1Q8WXF1 523 aaKnown RBP22.36■■□□□ 1.17
CDHR3-210ENST00000474330 CNOT6LQ96LI5 555 aaKnown RBP22.36■■□□□ 1.17
CDHR3-210ENST00000474330 HTATIP2Q9BUP3 242 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 KIFC3Q9BVG8 833 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 TBX20Q9UMR3 447 aa22.36■■□□□ 1.17
CDHR3-210ENST00000474330 RRN3P2A6NIE6 340 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 CETN3O15182 167 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 MYL3P08590 195 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 RPL13P26373 211 aaKnown RBP22.35■■□□□ 1.17
CDHR3-210ENST00000474330 IGBP1P78318 339 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 KIAA0753Q2KHM9 967 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 GNASQ5JWF2 1037 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 MAP4K3Q8IVH8 894 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 SYCP3Q8IZU3 236 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 LRRC71Q8N4P6 559 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 KATNAL1Q9BW62 490 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 C11orf49Q9H6J7 331 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 CGNQ9P2M7 1197 aaKnown RBP22.35■■□□□ 1.17
CDHR3-210ENST00000474330 MYADML2A6NDP7 307 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 GNA14O95837 355 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 TPM3P06753 285 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 NR2F2P24468 414 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 PSEN2P49810 448 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 DNM2P50570 870 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 SNRPFP62306 86 aaKnown RBP22.35■■□□□ 1.17
CDHR3-210ENST00000474330 PURAQ00577 322 aaKnown RBP22.35■■□□□ 1.17
CDHR3-210ENST00000474330 MFSD10Q14728 455 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 NR1I3Q14994 352 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 GRIK4Q16099 956 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 FILIP1LQ4L180 1135 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 MTHFD1LQ6UB35 978 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 CREBRFQ8IUR6 639 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 LINC01465Q8N7H1 131 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 EXOC7Q9UPT5 735 aa22.35■■□□□ 1.17
CDHR3-210ENST00000474330 SIP14410 1827 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 NRCAMQ92823 1304 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 ASAP2O43150 1006 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 ZEB2O60315 1214 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 NR3C1P04150 777 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 COPB1P53618 953 aaKnown RBP22.34■■□□□ 1.17
CDHR3-210ENST00000474330 CAPSQ13938 189 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 DEPTORQ8TB45 409 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 TMEM174Q8WUU8 243 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 IKZF4Q9H2S9 585 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 RTN4Q9NQC3 1192 aaKnown RBP22.34■■□□□ 1.17
CDHR3-210ENST00000474330 AGPAT3Q9NRZ7 376 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 INTS13Q9NVM9 706 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 SUCLA2Q9P2R7 463 aaPredicted RBP22.34■■□□□ 1.17
CDHR3-210ENST00000474330 SCN10AQ9Y5Y9 1956 aa22.34■■□□□ 1.17
CDHR3-210ENST00000474330 LRRIQ4A6NIV6 560 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 H0YGN5 161 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 CST5P28325 142 aaPredicted RBP22.33■■□□□ 1.17
CDHR3-210ENST00000474330 MARSP56192 900 aaKnown RBP22.33■■□□□ 1.17
CDHR3-210ENST00000474330 LAMTOR4Q0VGL1 99 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 MYBPC2Q14324 1141 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 MARCH8Q5T0T0 291 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 RNF180Q86T96 592 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 C12orf56Q8IXR9 622 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 METTL13Q8N6R0 699 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 TUBGCP2Q9BSJ2 902 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 TMEM134Q9H6X4 195 aa22.33■■□□□ 1.17
CDHR3-210ENST00000474330 CLIC2O15247 247 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 SMIM10L2AP0DMW4 78 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 SMIM10L2BP0DMW5 78 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 TMOD1P28289 359 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 SLC9A9Q8IVB4 645 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 KLHDC9Q8NEP7 349 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 ZBTB10Q96DT7 871 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 DMAC2Q9NW81 257 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 TAB2Q9NYJ8 693 aa22.32■■□□□ 1.16
CDHR3-210ENST00000474330 DNM1LO00429 736 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 N4BP3O15049 544 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 MTIF2P46199 727 aaKnown RBP22.31■■□□□ 1.16
CDHR3-210ENST00000474330 CLCN3P51790 818 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 TAS1R3Q7RTX0 852 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 MTG1Q9BT17 334 aaPredicted RBP22.31■■□□□ 1.16
CDHR3-210ENST00000474330 VPS16Q9H269 839 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 SETD4Q9NVD3 440 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 K7ERI5 159 aa22.31■■□□□ 1.16
CDHR3-210ENST00000474330 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
CDHR3-210ENST00000474330 EFNA5P52803 228 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms