RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 ASAP2O43150 1006 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 SSTR3P32745 418 aaPredicted RBP17.63■□□□□ 0.41
CDPF1-205ENST00000474256 PBX3P40426 434 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 COASYQ13057 564 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 DUSP6Q16828 381 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 C8orf34Q49A92 452 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 SLC39A11Q8N1S5 342 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 CDCA3Q99618 268 aaPredicted RBP17.63■□□□□ 0.41
CDPF1-205ENST00000474256 MINDY3Q9H8M7 445 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 XPNPEP1Q9NQW7 623 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 BMP2KQ9NSY1 1161 aaPredicted RBP17.63■□□□□ 0.41
CDPF1-205ENST00000474256 AGPAT5Q9NUQ2 364 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 FAM105AQ9NUU6 356 aa17.63■□□□□ 0.41
CDPF1-205ENST00000474256 PER2O15055 1255 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 SRGAP2CP0DJJ0 459 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 HOXA11P31270 313 aaPredicted RBP17.62■□□□□ 0.41
CDPF1-205ENST00000474256 TXKP42681 527 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 RAB27AP51159 221 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 KRT17Q04695 432 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 SAFBQ15424 915 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDPF1-205ENST00000474256 SMRP1Q8NCR6 262 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 LPPQ93052 612 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 ZSCAN31Q96LW9 406 aaPredicted RBP17.62■□□□□ 0.41
CDPF1-205ENST00000474256 MTRQ99707 1265 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 TCF25Q9BQ70 676 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 TMEM60Q9H2L4 133 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 NGRNQ9NPE2 291 aaKnown RBP17.62■□□□□ 0.41
CDPF1-205ENST00000474256 C11orf16Q9NQ32 467 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 ANKEF1Q9NU02 776 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 SPG21Q9NZD8 308 aa17.62■□□□□ 0.41
CDPF1-205ENST00000474256 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 MEIS3P2A8K0S8 358 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 GPR37L1O60883 481 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 GUCY1B3Q02153 619 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 KCNC3Q14003 757 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 RNF149Q8NC42 400 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 VN1R2Q8NFZ6 395 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 C8orf76Q96K31 380 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 LRFN3Q9BTN0 628 aa17.61■□□□□ 0.41
CDPF1-205ENST00000474256 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
CDPF1-205ENST00000474256 OFD1O75665 1012 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 DGAT1O75907 488 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 MCM7P33993 719 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 RARRES1P49788 294 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 BCAR1P56945 870 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 POU5F1BQ06416 359 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 MXD4Q14582 209 aaPredicted RBP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 PCBP1Q15365 356 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 LONRF3Q496Y0 759 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 TMEM31Q5JXX7 168 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 PLPP4Q5VZY2 271 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 GLB1LQ6UWU2 654 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 TMEM184AQ6ZMB5 413 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 MRPL10Q7Z7H8 261 aaKnown RBP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 FBXO18Q8NFZ0 1043 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 ENTPD7Q9NQZ7 604 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 SH2B1Q9NRF2 756 aaPredicted RBP17.6■□□□□ 0.41
CDPF1-205ENST00000474256 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 PLXNA4Q9HCM2 1894 aa17.6■□□□□ 0.41
CDPF1-205ENST00000474256 POTEMA6NI47 508 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 HIDE1A8MVS5 230 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 SPATA31C1P0DKV0 1188 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 ALADP13716 330 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 ARL2P36404 184 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 PTENP60484 403 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
CDPF1-205ENST00000474256 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
CDPF1-205ENST00000474256 ORC2Q13416 577 aaPredicted RBP17.59■□□□□ 0.41
CDPF1-205ENST00000474256 NOMO2Q5JPE7 1267 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 UBXN11Q5T124 520 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 IFNLR1Q8IU57 520 aaPredicted RBP17.59■□□□□ 0.41
CDPF1-205ENST00000474256 PGBD4Q96DM1 585 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 POP1Q99575 1024 aaKnown RBP17.59■□□□□ 0.41
CDPF1-205ENST00000474256 TBC1D13Q9NVG8 400 aa17.59■□□□□ 0.41
CDPF1-205ENST00000474256 CARNS1A5YM72 827 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 NT5C1B-RDH14C9J2C7 533 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 RBM25P49756 843 aaKnown RBP17.58■□□□□ 0.4
CDPF1-205ENST00000474256 AGMOQ6ZNB7 445 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 TMC7Q7Z402 723 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 CATSPER3Q86XQ3 398 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 MRPL43Q8N983 215 aaKnown RBP17.58■□□□□ 0.4
CDPF1-205ENST00000474256 ASAP3Q8TDY4 903 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 PIGOQ8TEQ8 1089 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 NRDE2Q9H7Z3 1164 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 RAPGEFL1Q9UHV5 662 aa17.58■□□□□ 0.4
CDPF1-205ENST00000474256 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDPF1-205ENST00000474256 GALTP07902 379 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 AXLP30530 894 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 TFDP1Q14186 410 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 TMEM173Q86WV6 379 aaPredicted RBP17.57■□□□□ 0.4
CDPF1-205ENST00000474256 TMEM169Q96HH4 297 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 NFKBIZQ9BYH8 718 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 RSAD1Q9HA92 442 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms