RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 AHCYL2Q96HN2 611 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 DYDC2Q96IM9 177 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 MYL10Q9BUA6 226 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 MEGF9Q9H1U4 602 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 OR10A2Q9H208 303 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 MTG2Q9H4K7 406 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 TYW1Q9NV66 732 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PCDHB6Q9Y5E3 794 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PHLDB1Q86UU1 1377 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 DAPK3O43293 454 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 FSBPO95073 299 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 ADCY8P40145 1251 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 KCNQ1P51787 676 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 MANFP55145 182 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 AMPD3Q01432 767 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 NFYCQ13952 458 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 NOLC1Q14978 699 aaKnown RBP eCLIP4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 NRN1LQ496H8 165 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 AGBL4Q5VU57 503 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 SLFN13Q68D06 897 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 GLB1L2Q8IW92 636 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 CLRN3Q8NCR9 226 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 OR14C36Q8NHC7 312 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 ZNF496Q96IT1 587 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 WDR92Q96MX6 357 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 NOL10Q9BSC4 688 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 CSRNP2Q9H175 543 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 SLC5A4Q9NY91 659 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 ZFR2Q9UPR6 939 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 ZDHHC9Q9Y397 364 aa4.5□□□□□ -1.69
ECHDC1-213ENST00000474240 MYPNQ86TC9 1320 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 CFBP00751 764 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 PFKMP08237 780 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 POU3F3P20264 500 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 ENPP1P22413 925 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 LMO1P25800 156 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 IGBP1P78318 339 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 MEF2AQ02078 507 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 DPTQ07507 201 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 SPIDRQ14159 915 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 USP30Q70CQ3 517 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 SLC7A6OSQ96CW6 309 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 ZNF503Q96F45 646 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 SPEF1Q9Y4P9 236 aa4.49□□□□□ -1.69
ECHDC1-213ENST00000474240 NRP1O14786 923 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 ARHGAP6O43182 974 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 MTSS1O43312 755 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 ID4P47928 161 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 MRE11P49959 708 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 GUCY2FP51841 1108 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 SLC5A3P53794 718 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 RAC3P60763 192 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 KRT85P78386 507 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 MRPS9P82933 396 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 PCOLCEQ15113 449 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 UGT8Q16880 541 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 ANO4Q32M45 955 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 GAGE13Q4V321 117 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 FAM180AQ6UWF9 173 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 LMBR1LQ6UX01 489 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 UNC5BQ8IZJ1 945 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 AMER2Q8N7J2 671 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 PRPF38AQ8NAV1 312 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 GCDHQ92947 438 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 ORAI2Q96SN7 254 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 C14orf93Q9H972 538 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 PUF60Q9UHX1 559 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 NR2E1Q9Y466 385 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 PPP2R3BQ9Y5P8 575 aa4.48□□□□□ -1.69
ECHDC1-213ENST00000474240 A0A087X1B8 175 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 ELL2O00472 640 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 NARSO43776 548 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 PPFIA2O75334 1257 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 PRKD3O94806 890 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 PCDH8O95206 1070 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 RPS19P39019 145 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 DGCR2P98153 550 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 PTH1RQ03431 593 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 KLF1Q13351 362 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 PRKD1Q15139 912 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 ZBTB41Q5SVQ8 909 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 PPP1R14CQ8TAE6 165 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 LMBR1Q8WVP7 490 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 GAB3Q8WWW8 586 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 AUTS2Q8WXX7 1259 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 NKD2Q969F2 451 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 CRAMP1Q96RY5 1269 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 ADOQ96SZ5 270 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 SLC6A15Q9H2J7 730 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 NELFAQ9H3P2 528 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 TOPORSQ9NS56 1045 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 HOMER2Q9NSB8 354 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 CDC42EP3Q9UKI2 254 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 FAM184BQ9ULE4 1060 aa4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 CTDP1Q9Y5B0 961 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-213ENST00000474240 LOC105371045A0A1W2PR82 267 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 PRSS38A1L453 326 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms