RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LIFRP42702 1097 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CLK2P49760 499 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 METAP2P50579 478 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 NAPAP54920 295 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 BCAR1P56945 870 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 NLRP11P59045 1033 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 ANGPT1Q15389 498 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 ATAT1Q5SQI0 421 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 SWSAP1Q6NVH7 229 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 PPP1R18Q6NYC8 613 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 MIS18BP1Q6P0N0 1132 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 TMC5Q6UXY8 1006 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 MICU3Q86XE3 530 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 VPS52Q8N1B4 723 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 TMTC2Q8N394 836 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 LRRC71Q8N4P6 559 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 FANCBQ8NB91 859 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 DTWD2Q8NBA8 298 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 RNF169Q8NCN4 708 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 FLCNQ8NFG4 579 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 HELQQ8TDG4 1101 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 SLC22A17Q8WUG5 538 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CRYGNQ8WXF5 182 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 AUTS2Q8WXX7 1259 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 TMEM169Q96HH4 297 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 ZFRQ96KR1 1074 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CYP26B1Q9NR63 512 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 DBR1Q9UK59 544 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 DUSP12Q9UNI6 340 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 AKT3Q9Y243 479 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 RBM8AQ9Y5S9 174 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 IRAK3Q9Y616 596 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 SLC12A7Q9Y666 1083 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CEP295Q9C0D2 2601 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 MAGEB2O15479 319 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ZC3H11AO75152 810 aaKnown RBP eCLIP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 CTSAP10619 480 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 DARSP14868 501 aaKnown RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ZSCAN20P17040 1043 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 CA8P35219 290 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF76P36508 570 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ALDH7A1P49419 539 aaKnown RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 GPC3P51654 580 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ADCY7P51828 1080 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 POLGP54098 1239 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 FUT2Q10981 343 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 AP3B2Q13367 1082 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 TDGQ13569 410 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 BMS1Q14692 1282 aaKnown RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 PTPN14Q15678 1187 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF746Q6NUN9 644 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 CCDC149Q6ZUS6 474 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 OTOP3Q7RTS5 596 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 TRMT1LQ7Z2T5 733 aaKnown RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 GPR149Q86SP6 731 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 CABP7Q86V35 215 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 SGMS1Q86VZ5 419 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 PLA2G4DQ86XP0 818 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 CKAP2LQ8IYA6 745 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 SMAP1Q8IYB5 467 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 SIX5Q8N196 739 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 GPR161Q8N6U8 529 aaKnown RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 BCL7CQ8WUZ0 217 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ACSF2Q96CM8 615 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 RMDN1Q96DB5 314 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 IGSF21Q96ID5 467 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF668Q96K58 619 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 MAP7D2Q96T17 732 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 RTP3Q9BQQ7 232 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 VN1R3Q9BXE9 311 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 MRPL9Q9BYD2 267 aaKnown RBP5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 LRRC2Q9BYS8 371 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 SFXN1Q9H9B4 322 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 KCNK12Q9HB15 430 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 WDR70Q9NW82 654 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 BARHL2Q9NY43 387 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 CEP131Q9UPN4 1083 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 USP24Q9UPU5 2620 aa5.81□□□□□ -1.48
SNRNP40-204ENST00000474025 MED19A0JLT2 244 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 CARNS1A5YM72 827 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 SMCO2A6NFE2 343 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 hCG_1984214I3L0E3 225 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 SLC27A2O14975 620 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 ADAMTS3O15072 1205 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 NARSO43776 548 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF862O60290 1169 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 B4GALT3O60512 393 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 N4BP1O75113 896 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 CSDE1O75534 798 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 LMNAP02545 664 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 OATP04181 439 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 PSAPP07602 524 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 GALTP07902 379 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 CYP3A4P08684 503 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 FGFR4P22455 802 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 TMOD1P28289 359 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 PHKA2P46019 1235 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 CLCN4P51793 760 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 SETQ01105 290 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms