RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 BTG3Q14201 252 aaPredicted RBP15.2■□□□□ 0.02
USF1-205ENST00000473969 C1orf186Q6ZWK4 172 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 GPBP1Q86WP2 473 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
USF1-205ENST00000473969 ABI1Q8IZP0 508 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 RNF169Q8NCN4 708 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
USF1-205ENST00000473969 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 RUSC1Q9BVN2 902 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 ELAC1Q9H777 363 aaKnown RBP15.2■□□□□ 0.02
USF1-205ENST00000473969 C17orf75Q9HAS0 396 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 AGPAT5Q9NUQ2 364 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 PRMT7Q9NVM4 692 aaPredicted RBP15.2■□□□□ 0.02
USF1-205ENST00000473969 TMEM161AQ9NX61 479 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 PHLPP2Q6ZVD8 1323 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 DGKIO75912 1065 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 RAB27AP51159 221 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 EFNA5P52803 228 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 PEX3P56589 373 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 FAM189BP81408 668 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 MBTD1Q05BQ5 628 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 MCM6Q14566 821 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 MAPK6Q16659 721 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 NOTUMQ6P988 496 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 USP49Q70CQ1 688 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 SV2BQ7L1I2 683 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 ECHDC2Q86YB7 292 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 PGBD4Q96DM1 585 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
USF1-205ENST00000473969 GAS2L1Q99501 681 aaPredicted RBP15.19■□□□□ 0.02
USF1-205ENST00000473969 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 TTYH1Q9H313 450 aaPredicted RBP15.19■□□□□ 0.02
USF1-205ENST00000473969 MINDY3Q9H8M7 445 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 POLD4Q9HCU8 107 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 KMT5AQ9NQR1 393 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 MTMR10Q9NXD2 777 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 ZDHHC9Q9Y397 364 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
USF1-205ENST00000473969 SIP14410 1827 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 MICAL3Q7RTP6 2002 aa15.19■□□□□ 0.02
USF1-205ENST00000473969 A0A0U1RQF3 1178 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 LCHNA4D1U4 455 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 K7ERI5 159 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 FAM13AO94988 1023 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 EOMESO95936 686 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 TAP1Q03518 808 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 SPOUT1Q5T280 376 aaKnown RBP15.18■□□□□ 0.02
USF1-205ENST00000473969 CMTR2Q8IYT2 770 aaKnown RBP15.18■□□□□ 0.02
USF1-205ENST00000473969 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 PDILTQ8N807 584 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 ARNTL2Q8WYA1 636 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 CCDC51Q96ER9 411 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 PRIMPOLQ96LW4 560 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 SAMD11Q96NU1 681 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 TRIM6Q9C030 488 aaPredicted RBP15.18■□□□□ 0.02
USF1-205ENST00000473969 SCAND2PQ9GZW5 306 aaPredicted RBP15.18■□□□□ 0.02
USF1-205ENST00000473969 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 CERS4Q9HA82 394 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 BLOC1S4Q9NUP1 217 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
USF1-205ENST00000473969 RCOR1Q9UKL0 485 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 RWDD3Q9Y3V2 267 aa15.18■□□□□ 0.02
USF1-205ENST00000473969 ADGRA3Q8IWK6 1321 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 ARID2Q68CP9 1835 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 LINC01553A4QN01 128 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 TBKBP1A7MCY6 615 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 SFI1A8K8P3 1242 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 H0YCG3 227 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 TSPAN1O60635 241 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 TBCAO75347 108 aaKnown RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 PRKCBP05771 671 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 PLS3P13797 630 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 NPTX2P47972 431 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 GRIN2CQ14957 1233 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 CDCA2Q69YH5 1023 aaPredicted RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 APBB1IPQ7Z5R6 666 aaPredicted RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 CNNM3Q8NE01 707 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 SP7Q8TDD2 431 aaPredicted RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 BSNDQ8WZ55 320 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 ZNF689Q96CS4 500 aaPredicted RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 CPB2Q96IY4 423 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 PYM1Q9BRP8 204 aaKnown RBP15.17■□□□□ 0.02
USF1-205ENST00000473969 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 PCDHA7Q9UN72 937 aa15.17■□□□□ 0.02
USF1-205ENST00000473969 LOXHD1Q8IVV2 1947 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 FGFR1P11362 822 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 ERVK-21P61565 698 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
USF1-205ENST00000473969 STRN3Q13033 797 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 FAM187BQ17R55 369 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms