RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 SMARCE1Q969G3 411 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 DRC1Q96MC2 740 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 RMND1Q9NWS8 449 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 CUL9Q8IWT3 2517 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 TRIP12Q14669 1992 aaPredicted RBP10.05□□□□□ -0.8
SMG5-203ENST00000473643 NPHP3-ACAD11A0A0J9YXS1 232 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 RBAK-RBAKDNI3L0D1 243 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 ASAP2O43150 1006 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 HIP1RO75146 1068 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 GJB5O95377 273 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 RPLP2P05387 115 aaKnown RBP10.05□□□□□ -0.8
SMG5-203ENST00000473643 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
SMG5-203ENST00000473643 CTSHP09668 335 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 MAPTP10636 758 aaKnown RBP10.05□□□□□ -0.8
SMG5-203ENST00000473643 PLS3P13797 630 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 TMOD1P28289 359 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 KCNJ6P48051 423 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 ASIC1P78348 528 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 DEFB103AP81534 67 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 CDC42EP1Q00587 391 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 MGAT3Q09327 533 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 PSMD2Q13200 908 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 EFCAB12Q6NXP0 572 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 KIAA0319LQ8IZA0 1049 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 NME8Q8N427 588 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 TRIML1Q8N9V2 468 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 MAFAQ8NHW3 353 aaPredicted RBP10.05□□□□□ -0.8
SMG5-203ENST00000473643 DNAJB3Q8WWF6 145 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 SPIRE2Q8WWL2 714 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 SEPT8Q92599 483 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 FIZ1Q96SL8 496 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 GTPBP4Q9BZE4 634 aaKnown RBP10.05□□□□□ -0.8
SMG5-203ENST00000473643 ST6GALNAC4Q9H4F1 302 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 PRDM12Q9H4Q4 367 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 PARVGQ9HBI0 331 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 PANK4Q9NVE7 773 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 SEL1LQ9UBV2 794 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 XIRP2A4UGR9 3374 aa10.05□□□□□ -0.8
SMG5-203ENST00000473643 SCN5AQ14524 2016 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 TLL1O43897 1013 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 TBCAO75347 108 aaKnown RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 FAM13AO94988 1023 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 CA3P07451 260 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 IDEP14735 1019 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 POU3F3P20264 500 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 SCP2P22307 547 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 GLRA2P23416 452 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 DNM2P50570 870 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 IGBP1P78318 339 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 TAP1Q03518 808 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 COASYQ13057 564 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 DRP2Q13474 957 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 MORC3Q14149 939 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 MXD4Q14582 209 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 COBLL1Q53SF7 1204 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 HERC4Q5GLZ8 1057 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 FAM102BQ5T8I3 360 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMG5-203ENST00000473643 MAEAQ7L5Y9 396 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 TMCO2Q7Z6W1 182 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 RSPH3Q86UC2 560 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 PSPC1Q8WXF1 523 aaKnown RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 ERCC4Q92889 916 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 CCDC47Q96A33 483 aaKnown RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 TMEM143Q96AN5 459 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 ZBTB10Q96DT7 871 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 RAD9AQ99638 391 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 SUGCTQ9HAC7 445 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 GPRC5CQ9NQ84 441 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 LARSQ9P2J5 1176 aaKnown RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 SUCLA2Q9P2R7 463 aaPredicted RBP10.04□□□□□ -0.8
SMG5-203ENST00000473643 MAN1B1Q9UKM7 699 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 MYO9BQ13459 2157 aa10.04□□□□□ -0.8
SMG5-203ENST00000473643 TRANK1O15050 2925 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 MUC3AQ02505 3323 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.03□□□□□ -0.8
SMG5-203ENST00000473643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.03□□□□□ -0.8
SMG5-203ENST00000473643 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 BMP6P22004 513 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 NAMPTP43490 491 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 NCKAP1LP55160 1127 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
SMG5-203ENST00000473643 RAD51AP2Q09MP3 1159 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 STK4Q13043 487 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 LPIN1Q14693 890 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 PPP2R5AQ15172 486 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 ZSCAN23Q3MJ62 389 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 FBXO47Q5MNV8 452 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 ODR4Q5SWX8 454 aa10.03□□□□□ -0.8
SMG5-203ENST00000473643 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
SMG5-203ENST00000473643 ZNF720Q7Z2F6 126 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms