RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 POLD1P28340 1107 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 MLLT6P55198 1093 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 DLX2Q07687 328 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 MGAT5Q09328 741 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 MGAT2Q10469 447 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 ZNF267Q14586 743 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 GJC2Q5T442 439 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 LMBR1LQ6UX01 489 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 USP45Q70EL2 814 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 FAM129CQ86XR2 697 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 UNC5BQ8IZJ1 945 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 PPM1NQ8N819 430 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 MARCH10Q8NA82 808 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 DIS3LQ8TF46 1054 aaKnown RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 DMRT3Q9NQL9 472 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 C1orf112Q9NSG2 853 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 SAP30BPQ9UHR5 308 aaKnown RBP8.05□□□□□ -1.12
SEC22A-204ENST00000473494 RCAN3Q9UKA8 241 aa8.05□□□□□ -1.12
SEC22A-204ENST00000473494 A0A1W2PR48 441 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 HTRA2O43464 458 aaPredicted RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 AP1G1O43747 822 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 TAL1P17542 331 aaPredicted RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 EDNRBP24530 442 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 RPL13P26373 211 aaKnown RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 PURAQ00577 322 aaKnown RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 PPP3CAQ08209 521 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 GRM3Q14832 879 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 TRMT10BQ6PF06 316 aaKnown RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 KLHDC10Q6PID8 442 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 WDR92Q96MX6 357 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 EPB41L4AQ9HCS5 686 aaPredicted RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 SPATA6Q9NWH7 488 aaPredicted RBP8.04□□□□□ -1.12
SEC22A-204ENST00000473494 DNAI1Q9UI46 699 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 VWA7Q9Y334 891 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 IRAK3Q9Y616 596 aa8.04□□□□□ -1.12
SEC22A-204ENST00000473494 LY86O95711 162 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 PDCP20941 246 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 FXR1P51114 621 aaKnown RBP eCLIP8.03□□□□□ -1.12
SEC22A-204ENST00000473494 GALEQ14376 348 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 MAN2A1Q16706 1144 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 MAP9Q49MG5 647 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 VWA3BQ502W6 1294 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 SAPCD2Q86UD0 394 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 REXO1L1PQ8IX06 675 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 IFNL2Q8IZJ0 200 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 NRG4Q8WWG1 115 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 HOXB13Q92826 284 aaPredicted RBP8.03□□□□□ -1.12
SEC22A-204ENST00000473494 MVB12AQ96EY5 273 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 FAM193BQ96PV7 902 aaPredicted RBP8.03□□□□□ -1.12
SEC22A-204ENST00000473494 MAP3K14Q99558 947 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 ADI1Q9BV57 179 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
SEC22A-204ENST00000473494 LIMCH1Q9UPQ0 1083 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 PTPN22Q9Y2R2 807 aa8.03□□□□□ -1.12
SEC22A-204ENST00000473494 CCDC154A6NI56 674 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 FAM171A2A8MVW0 826 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 ETV2O00321 342 aaPredicted RBP8.02□□□□□ -1.13
SEC22A-204ENST00000473494 PLIN1O60240 522 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 MESP2Q0VG99 397 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 ARHGAP29Q52LW3 1261 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 TRIM68Q6AZZ1 485 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 DDX20Q9UHI6 824 aaKnown RBP8.02□□□□□ -1.13
SEC22A-204ENST00000473494 MAGEL2Q9UJ55 1249 aa8.02□□□□□ -1.13
SEC22A-204ENST00000473494 H3BML4 177 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 FSBPO95073 299 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 HMGCRP04035 888 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 GAAP10253 952 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 TRIM27P14373 513 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 STAT5BP51692 787 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 SESN2P58004 480 aaPredicted RBP8.01□□□□□ -1.13
SEC22A-204ENST00000473494 SSPNQ14714 243 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 ZNF827Q17R98 1081 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 C3orf36Q3SXR2 165 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 MIGA2Q7L4E1 593 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 PIK3C3Q8NEB9 887 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 NUDT10Q8NFP7 164 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 KCNN1Q92952 543 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 TIFAQ96CG3 184 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 C1GALT1C1Q96EU7 318 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 NUDT11Q96G61 164 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 YTHDC1Q96MU7 727 aaKnown RBP8.01□□□□□ -1.13
SEC22A-204ENST00000473494 ACO2Q99798 780 aaKnown RBP8.01□□□□□ -1.13
SEC22A-204ENST00000473494 KATNBL1Q9H079 304 aa8.01□□□□□ -1.13
SEC22A-204ENST00000473494 SH3D21A4FU49 640 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 LTA4HP09960 611 aaKnown RBP8□□□□□ -1.13
SEC22A-204ENST00000473494 PI3P19957 117 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 IL13P35225 146 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 KCNQ1P51787 676 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 CD69Q07108 199 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 UBE4AQ14139 1066 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 MST1LQ2TV78 715 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 PGS1Q32NB8 556 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 CNKSR3Q6P9H4 555 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 SLC4A10Q6U841 1118 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 CHST15Q7LFX5 561 aaPredicted RBP8□□□□□ -1.13
SEC22A-204ENST00000473494 GRAMD1CQ8IYS0 662 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 ZBTB34Q8NCN2 500 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 OR2I1PQ8NGU4 316 aa8□□□□□ -1.13
SEC22A-204ENST00000473494 FBXO41Q8TF61 875 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms