RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 PANK3Q9H999 370 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 KDM3BQ7LBC6 1761 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 SCN7AQ01118 1682 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 PRAMEF22A3QJZ6 481 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 DIAPH1O60610 1272 aaKnown RBP8.98□□□□□ -0.97
A1CF-209ENST00000473480 DGKIO75912 1065 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 HSPA5P11021 654 aaKnown RBP8.98□□□□□ -0.97
A1CF-209ENST00000473480 NTRK3Q16288 839 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 C1orf141Q5JVX7 400 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 ZNF530Q6P9A1 599 aaPredicted RBP8.98□□□□□ -0.97
A1CF-209ENST00000473480 MILR1Q7Z6M3 343 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 B3GNT8Q7Z7M8 397 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 SUPT20HQ8NEM7 779 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 SH3TC2Q8TF17 1288 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 EPB41L1Q9H4G0 881 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 GGA3Q9NZ52 723 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 PALD1Q9ULE6 856 aa8.98□□□□□ -0.97
A1CF-209ENST00000473480 FAM221BA6H8Z2 402 aa8.97□□□□□ -0.97
A1CF-209ENST00000473480 MC3RP41968 323 aa8.97□□□□□ -0.97
A1CF-209ENST00000473480 CACNB2Q08289 660 aaPredicted RBP8.97□□□□□ -0.97
A1CF-209ENST00000473480 LONRF2Q1L5Z9 754 aa8.97□□□□□ -0.97
A1CF-209ENST00000473480 ETV3LQ6ZN32 361 aa8.97□□□□□ -0.97
A1CF-209ENST00000473480 DNAJC2Q99543 621 aaKnown RBP8.97□□□□□ -0.97
A1CF-209ENST00000473480 KIF20BQ96Q89 1820 aa8.96□□□□□ -0.97
A1CF-209ENST00000473480 MANSC4A6NHS7 340 aaPredicted RBP8.96□□□□□ -0.98
A1CF-209ENST00000473480 TCERG1O14776 1098 aaKnown RBP8.96□□□□□ -0.98
A1CF-209ENST00000473480 HGSO14964 777 aaPredicted RBP8.96□□□□□ -0.98
A1CF-209ENST00000473480 MSCO60682 206 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 CAMTA2O94983 1202 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 CAP1Q01518 475 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 KIZQ2M2Z5 673 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 OTUD7BQ6GQQ9 843 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 KCNT2Q6UVM3 1135 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 LBX2Q6XYB7 198 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 CDIP1Q9H305 208 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
A1CF-209ENST00000473480 TRBV23-1A0A0A0MS06 115 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 BLACEA4D250 179 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 IL13P35225 146 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 IL6STP40189 918 aaPredicted RBP8.95□□□□□ -0.98
A1CF-209ENST00000473480 GPR85P60893 370 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 SUMO1P63165 101 aaKnown RBP8.95□□□□□ -0.98
A1CF-209ENST00000473480 CRHR2Q13324 411 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 STEAP3Q658P3 488 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 CLEC4GQ6UXB4 293 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 MIB1Q86YT6 1006 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 IFNL3Q8IZI9 196 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.95□□□□□ -0.98
A1CF-209ENST00000473480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.95□□□□□ -0.98
A1CF-209ENST00000473480 RPGRQ92834 1020 aaKnown RBP8.95□□□□□ -0.98
A1CF-209ENST00000473480 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
A1CF-209ENST00000473480 PMF1-BGLAPU3KQ54 211 aa8.95□□□□□ -0.98
A1CF-209ENST00000473480 MAFKO60675 156 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 GJB1P08034 283 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 FAM153BP0C7A2 387 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 RPS12P25398 132 aaKnown RBP8.94□□□□□ -0.98
A1CF-209ENST00000473480 SLC39A6Q13433 755 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 FBLN7Q53RD9 439 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 ZC3H12BQ5HYM0 836 aaKnown RBP8.94□□□□□ -0.98
A1CF-209ENST00000473480 EMC4Q5J8M3 183 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 FAM209AQ5JX71 171 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 SMARCC2Q8TAQ2 1214 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 DRC1Q96MC2 740 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 DNAJC7Q99615 494 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 KRTAP9-9Q9BYP9 154 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 KRTAP9-4Q9BYQ2 154 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 OSBPL2Q9H1P3 480 aa8.94□□□□□ -0.98
A1CF-209ENST00000473480 ZNF646O15015 1829 aaPredicted RBP8.94□□□□□ -0.98
A1CF-209ENST00000473480 KRIT1O00522 736 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 CYP2C8P10632 490 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 MRE11P49959 708 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 KIAA2012Q0VF49 1180 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 FOXB2Q5VYV0 432 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 MAMDC2Q7Z304 686 aaPredicted RBP8.93□□□□□ -0.98
A1CF-209ENST00000473480 MORC1Q86VD1 984 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 ZC3H18Q86VM9 953 aaKnown RBP8.93□□□□□ -0.98
A1CF-209ENST00000473480 LINC01356Q8N9X3 169 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 FNIP1Q8TF40 1166 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 SLC52A2Q9HAB3 445 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 PCDH18Q9HCL0 1135 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 PCDHB4Q9Y5E5 795 aa8.93□□□□□ -0.98
A1CF-209ENST00000473480 KIF7Q2M1P5 1343 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 TADA3O75528 432 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 GRK2P25098 689 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 NF2P35240 595 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 GRK3P35626 688 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 DDX10Q13206 875 aaKnown RBP8.92□□□□□ -0.98
A1CF-209ENST00000473480 SULT6B1Q6IMI4 303 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 FAM126BQ8IXS8 530 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 PTPRN2Q92932 1015 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 DDX11Q96FC9 970 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 RBM17Q96I25 401 aaKnown RBP8.92□□□□□ -0.98
A1CF-209ENST00000473480 YIPF4Q9BSR8 244 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 ALG1Q9BT22 464 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 DHRS4Q9BTZ2 278 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 JAM3Q9BX67 310 aa8.92□□□□□ -0.98
A1CF-209ENST00000473480 RTFDC1Q9BY42 306 aaPredicted RBP8.92□□□□□ -0.98
A1CF-209ENST00000473480 NGRNQ9NPE2 291 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms