RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 CTTNQ14247 550 aaKnown RBP21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 EMC2Q15006 297 aa21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 CATSPER4Q7RTX7 472 aa21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 DIS3L2Q8IYB7 885 aaKnown RBP21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 PSPC1Q8WXF1 523 aaKnown RBP21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 MRPL9Q9BYD2 267 aaKnown RBP21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 ZSWIM4Q9H7M6 989 aa21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 ENTPD7Q9NQZ7 604 aa21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 FAM105AQ9NUU6 356 aa21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 SPG21Q9NZD8 308 aa21.01■□□□□ 0.95
CCDC88B-206ENST00000473405 FSD2A1L4K1 749 aa21■□□□□ 0.95
CCDC88B-206ENST00000473405 MARCH6O60337 910 aa21■□□□□ 0.95
CCDC88B-206ENST00000473405 LAMTOR4Q0VGL1 99 aa21■□□□□ 0.95
CCDC88B-206ENST00000473405 LONRF3Q496Y0 759 aa21■□□□□ 0.95
CCDC88B-206ENST00000473405 EXOC8Q8IYI6 725 aa21■□□□□ 0.95
CCDC88B-206ENST00000473405 USP15Q9Y4E8 981 aaPredicted RBP21■□□□□ 0.95
CCDC88B-206ENST00000473405 ZNF623O75123 536 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 SLITRK3O94933 977 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 BAG4O95429 457 aaKnown RBP20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 SRGAP2CP0DJJ0 459 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 RAB27AP51159 221 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 BCAR1P56945 870 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 CALCRLQ16602 461 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 TMEM173Q86WV6 379 aaPredicted RBP20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 RSPH1Q8WYR4 309 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 HSD17B14Q9BPX1 270 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 EIF2AK1Q9BQI3 630 aaKnown RBP20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 NGRNQ9NPE2 291 aaKnown RBP20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 XPNPEP1Q9NQW7 623 aa20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 PUF60Q9UHX1 559 aaKnown RBP20.99■□□□□ 0.95
CCDC88B-206ENST00000473405 ZNF318Q5VUA4 2279 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 PRR33A8MZF0 331 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 GAS2O43903 313 aaKnown RBP20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 NEMFO60524 1076 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 LYPLA2O95372 231 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 SKIP12755 728 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 KRT17Q04695 432 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 XKR9Q5GH70 373 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 TMEM184AQ6ZMB5 413 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 OTUD6AQ7L8S5 288 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 MTMR9Q96QG7 549 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 TTC12Q9H892 705 aaPredicted RBP20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 TBC1D13Q9NVG8 400 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 PCDHA12Q9UN75 941 aa20.98■□□□□ 0.95
CCDC88B-206ENST00000473405 TECTAO75443 2155 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 NT5C1B-RDH14C9J2C7 533 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 B4GALT3O60512 393 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 EIF5BO60841 1220 aaKnown RBP20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 ZC3H11AO75152 810 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 HOXA11P31270 313 aaPredicted RBP20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 TRIM29Q14134 588 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 GLB1LQ6UWU2 654 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 TMC7Q7Z402 723 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 SRGAP1Q7Z6B7 1085 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 FERMT3Q86UX7 667 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 TPH2Q8IWU9 490 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 TCP11Q8WWU5 503 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 SUSD6Q92537 303 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 PCDHB2Q9Y5E7 798 aa20.97■□□□□ 0.95
CCDC88B-206ENST00000473405 PIEZO1Q92508 2521 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 C2orf71A6NGG8 1288 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 OFD1O75665 1012 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 PLA2G5P39877 138 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 ALDH7A1P49419 539 aaKnown RBP20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 NOMO2Q5JPE7 1267 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 UBXN11Q5T124 520 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 AGMOQ6ZNB7 445 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 RNF135Q8IUD6 432 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 RNF149Q8NC42 400 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 MTRQ99707 1265 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 MUTYHQ9UIF7 546 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 INPP5FQ9Y2H2 1132 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 HCN4Q9Y3Q4 1203 aa20.96■□□□□ 0.95
CCDC88B-206ENST00000473405 LOC730098B7Z3J9 87 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 TXKP42681 527 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 SMC1AQ14683 1233 aaKnown RBP20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 HERC4Q5GLZ8 1057 aaPredicted RBP20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 ANKRD54Q6NXT1 300 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 LLGL2Q6P1M3 1020 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 SYCE2Q6PIF2 218 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 MRPL10Q7Z7H8 261 aaKnown RBP20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 MRPL43Q8N983 215 aaKnown RBP20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 TMEM169Q96HH4 297 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 S1PR5Q9H228 398 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 TMEM60Q9H2L4 133 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 NRDE2Q9H7Z3 1164 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 DNAJB4Q9UDY4 337 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 LIMCH1Q9UPQ0 1083 aa20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 TDRD15B5MCY1 1934 aaKnown RBP20.95■□□□□ 0.94
CCDC88B-206ENST00000473405 POTEMA6NI47 508 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 ASAP2O43150 1006 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 TECP42680 631 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 AFF1P51825 1210 aaKnown RBP20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 GUCY1B3Q02153 619 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 CBX2Q14781 532 aaPredicted RBP20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 CCDC83Q8IWF9 413 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 ASAP3Q8TDY4 903 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 IGSF21Q96ID5 467 aa20.94■□□□□ 0.94
CCDC88B-206ENST00000473405 VN1R3Q9BXE9 311 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms