RNA–Protein interactions for RNA: ENST00000472958.5

EXD3-204, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 4

Gene EXD3, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-204ENST00000472958 ST3GAL1Q11201 340 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 EMC2Q15006 297 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 CALCRLQ16602 461 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 PLPP4Q5VZY2 271 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 SRGAP1Q7Z6B7 1085 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 TCP11Q8WWU5 503 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 PRPF31Q8WWY3 499 aaKnown RBP21.43■■□□□ 1.02
EXD3-204ENST00000472958 ENTPD7Q9NQZ7 604 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 FAM105AQ9NUU6 356 aa21.43■■□□□ 1.02
EXD3-204ENST00000472958 CARNS1A5YM72 827 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 FAM86C2PA6NEL3 165 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 PER2O15055 1255 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 NEMFO60524 1076 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 LYPLA2O95372 231 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 SEC24BO95487 1268 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 LAMTOR4Q0VGL1 99 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 CTTNQ14247 550 aaKnown RBP21.42■■□□□ 1.02
EXD3-204ENST00000472958 XKR9Q5GH70 373 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 GLB1LQ6UWU2 654 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 VN1R2Q8NFZ6 395 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 TMEM143Q96AN5 459 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 EIF2AK1Q9BQI3 630 aaKnown RBP21.42■■□□□ 1.02
EXD3-204ENST00000472958 PCDHA12Q9UN75 941 aa21.42■■□□□ 1.02
EXD3-204ENST00000472958 ASAP2O43150 1006 aa21.41■■□□□ 1.02
EXD3-204ENST00000472958 SLITRK3O94933 977 aa21.41■■□□□ 1.02
EXD3-204ENST00000472958 SRGAP2BP0DMP2 458 aa21.41■■□□□ 1.02
EXD3-204ENST00000472958 KCNC3Q14003 757 aa21.41■■□□□ 1.02
EXD3-204ENST00000472958 TMEM184AQ6ZMB5 413 aa21.41■■□□□ 1.02
EXD3-204ENST00000472958 MTRQ99707 1265 aa21.41■■□□□ 1.02
EXD3-204ENST00000472958 BMP2KQ9NSY1 1161 aaPredicted RBP21.41■■□□□ 1.02
EXD3-204ENST00000472958 PRR33A8MZF0 331 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 SRGAP2CP0DJJ0 459 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 FOSBP53539 338 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 BCAR1P56945 870 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 FERMT3Q86UX7 667 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 TPH2Q8IWU9 490 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 LPPQ93052 612 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 PGBD4Q96DM1 585 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 HSD17B14Q9BPX1 270 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
EXD3-204ENST00000472958 MINDY3Q9H8M7 445 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 ANKEF1Q9NU02 776 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 LIMCH1Q9UPQ0 1083 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 HCN4Q9Y3Q4 1203 aa21.4■■□□□ 1.02
EXD3-204ENST00000472958 USP15Q9Y4E8 981 aaPredicted RBP21.4■■□□□ 1.02
EXD3-204ENST00000472958 HIDE1A8MVS5 230 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 WNT7AO00755 349 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 ZBTB39O15060 712 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 ALDH7A1P49419 539 aaKnown RBP21.39■■□□□ 1.01
EXD3-204ENST00000472958 RBM10P98175 930 aaKnown RBP21.39■■□□□ 1.01
EXD3-204ENST00000472958 SMC1AQ14683 1233 aaKnown RBP21.39■■□□□ 1.01
EXD3-204ENST00000472958 PCBP1Q15365 356 aaKnown RBP eCLIP21.39■■□□□ 1.01
EXD3-204ENST00000472958 NOMO2Q5JPE7 1267 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 TMC7Q7Z402 723 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 RNF149Q8NC42 400 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 TMEM169Q96HH4 297 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 MTMR9Q96QG7 549 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 XPNPEP1Q9NQW7 623 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 TBC1D13Q9NVG8 400 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 ARIH1Q9Y4X5 557 aaPredicted RBP21.39■■□□□ 1.01
EXD3-204ENST00000472958 PCDHB2Q9Y5E7 798 aa21.39■■□□□ 1.01
EXD3-204ENST00000472958 MEIS3P2A8K0S8 358 aa21.38■■□□□ 1.01
EXD3-204ENST00000472958 ZC3H11AO75152 810 aaKnown RBP eCLIP21.38■■□□□ 1.01
EXD3-204ENST00000472958 MXD4Q14582 209 aaPredicted RBP21.38■■□□□ 1.01
EXD3-204ENST00000472958 SAFBQ15424 915 aaKnown RBP eCLIP21.38■■□□□ 1.01
EXD3-204ENST00000472958 MRPL10Q7Z7H8 261 aaKnown RBP21.38■■□□□ 1.01
EXD3-204ENST00000472958 SUSD6Q92537 303 aa21.38■■□□□ 1.01
EXD3-204ENST00000472958 LLPHQ9BRT6 129 aaKnown RBP21.38■■□□□ 1.01
EXD3-204ENST00000472958 CNTNAP2Q9UHC6 1331 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 OFD1O75665 1012 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 DGAT1O75907 488 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 HOXA11P31270 313 aaPredicted RBP21.37■■□□□ 1.01
EXD3-204ENST00000472958 TXKP42681 527 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 LONRF3Q496Y0 759 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 HERC4Q5GLZ8 1057 aaPredicted RBP21.37■■□□□ 1.01
EXD3-204ENST00000472958 UBXN11Q5T124 520 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 IFNLR1Q8IU57 520 aaPredicted RBP21.37■■□□□ 1.01
EXD3-204ENST00000472958 MRPL43Q8N983 215 aaKnown RBP21.37■■□□□ 1.01
EXD3-204ENST00000472958 CCDC43Q96MW1 224 aaKnown RBP21.37■■□□□ 1.01
EXD3-204ENST00000472958 NRDE2Q9H7Z3 1164 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 INPP5FQ9Y2H2 1132 aa21.37■■□□□ 1.01
EXD3-204ENST00000472958 C2orf71A6NGG8 1288 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 LOC730098B7Z3J9 87 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 NT5C1B-RDH14C9J2C7 533 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 ERLIN2O94905 339 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 RARRES1P49788 294 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 PTENP60484 403 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 POU5F1BQ06416 359 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 ORC2Q13416 577 aaPredicted RBP21.36■■□□□ 1.01
EXD3-204ENST00000472958 TFDP1Q14186 410 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 CBX2Q14781 532 aaPredicted RBP21.36■■□□□ 1.01
EXD3-204ENST00000472958 ANKRD54Q6NXT1 300 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 AGMOQ6ZNB7 445 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 TMEM173Q86WV6 379 aaPredicted RBP21.36■■□□□ 1.01
EXD3-204ENST00000472958 RNF135Q8IUD6 432 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 CCDC83Q8IWF9 413 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 URGCPQ8TCY9 931 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 CCDC51Q96ER9 411 aa21.36■■□□□ 1.01
EXD3-204ENST00000472958 PHF7Q9BWX1 381 aaPredicted RBP21.36■■□□□ 1.01
EXD3-204ENST00000472958 POTEMA6NI47 508 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms