RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 KRT79Q5XKE5 535 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 LRRC43Q8N309 656 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 SPPL3Q8TCT6 385 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 PGBD4Q96DM1 585 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 MRPL9Q9BYD2 267 aaKnown RBP18.93■□□□□ 0.62
COMMD3-210ENST00000472610 POLR3FQ9H1D9 316 aaPredicted RBP18.93■□□□□ 0.62
COMMD3-210ENST00000472610 CWH43Q9H720 699 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 ALG13Q9NP73 1137 aaKnown RBP18.93■□□□□ 0.62
COMMD3-210ENST00000472610 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 NCK2O43639 380 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 ATF7P17544 494 aaPredicted RBP18.92■□□□□ 0.62
COMMD3-210ENST00000472610 CYP11B2P19099 503 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 GLRA2P23416 452 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 UBE3AQ05086 875 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 CAPSQ13938 189 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 ARL6IP4Q66PJ3 421 aaKnown RBP18.92■□□□□ 0.62
COMMD3-210ENST00000472610 PADI6Q6TGC4 694 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 COLGALT1Q8NBJ5 622 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 ASAP3Q8TDY4 903 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 SNX29Q8TEQ0 813 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 INTS4Q96HW7 963 aaKnown RBP18.92■□□□□ 0.62
COMMD3-210ENST00000472610 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
COMMD3-210ENST00000472610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.91■□□□□ 0.62
COMMD3-210ENST00000472610 CARNS1A5YM72 827 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 INO80B-WBP1J3KQ70 363 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 HOXA11P31270 313 aaPredicted RBP18.91■□□□□ 0.62
COMMD3-210ENST00000472610 TCEAL5Q5H9L2 206 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 CLLU1OSQ5K130 101 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 MAEAQ7L5Y9 396 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 KCTD17Q8N5Z5 321 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 CNNM3Q8NE01 707 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 HELQQ8TDG4 1101 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 POF1BQ8WVV4 589 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 PPP2R3CQ969Q6 453 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 DDX19AQ9NUU7 478 aaKnown RBP18.91■□□□□ 0.62
COMMD3-210ENST00000472610 DNM3Q9UQ16 869 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 PCDHB2Q9Y5E7 798 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 UNC80Q8N2C7 3258 aa18.91■□□□□ 0.62
COMMD3-210ENST00000472610 BMP15O95972 392 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 TFF2Q03403 129 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 IL17AQ16552 155 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 ECM1Q16610 540 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 NOTUMQ6P988 496 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 GLB1LQ6UWU2 654 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 LRRC55Q6ZSA7 311 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 MRPL10Q7Z7H8 261 aaKnown RBP18.9■□□□□ 0.62
COMMD3-210ENST00000472610 THNSL1Q8IYQ7 743 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 BHMT2Q9H2M3 363 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 UBE2ZQ9H832 354 aaPredicted RBP18.9■□□□□ 0.62
COMMD3-210ENST00000472610 PLXNA4Q9HCM2 1894 aa18.9■□□□□ 0.62
COMMD3-210ENST00000472610 LRRIQ4A6NIV6 560 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 K7ELQ4 463 aaPredicted RBP18.89■□□□□ 0.61
COMMD3-210ENST00000472610 TSPAN1O60635 241 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 FGF18O76093 207 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 PPM1AP35813 382 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 PLCB3Q01970 1234 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 MBTD1Q05BQ5 628 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 CAMK1Q14012 370 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 PPP2R5AQ15172 486 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 KCNT2Q6UVM3 1135 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 ZBTB8OSQ8IWT0 167 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 PABPC5Q96DU9 382 aaKnown RBP18.89■□□□□ 0.61
COMMD3-210ENST00000472610 C2orf40Q9H1Z8 148 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 GPRC5CQ9NQ84 441 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 PUF60Q9UHX1 559 aaKnown RBP18.89■□□□□ 0.61
COMMD3-210ENST00000472610 LZTS1Q9Y250 596 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 ATG2AQ2TAZ0 1938 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 CNTNAP2Q9UHC6 1331 aa18.89■□□□□ 0.61
COMMD3-210ENST00000472610 VPS37CA5D8V6 355 aaPredicted RBP18.88■□□□□ 0.61
COMMD3-210ENST00000472610 EYA4O95677 639 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 BMP1P13497 986 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 DNAJB1P25685 340 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 KRT17Q04695 432 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 NOMO2Q5JPE7 1267 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 UBXN11Q5T124 520 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 PDE12Q6L8Q7 609 aaKnown RBP18.88■□□□□ 0.61
COMMD3-210ENST00000472610 KIFAP3Q92845 792 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 LPPQ93052 612 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 PRIMPOLQ96LW4 560 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 CSRNP2Q9H175 543 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 UBN1Q9NPG3 1134 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 HCSTQ9UBK5 93 aa18.88■□□□□ 0.61
COMMD3-210ENST00000472610 DAXXQ9UER7 740 aaPredicted RBP18.88■□□□□ 0.61
COMMD3-210ENST00000472610 VWA3AA6NCI4 1184 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 PP2D1A8MPX8 630 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 REV3LO60673 3130 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 OFD1O75665 1012 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 NCLP19338 710 aaKnown RBP18.87■□□□□ 0.61
COMMD3-210ENST00000472610 CDC25AP30304 524 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 NAMPTP43490 491 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 ALDH7A1P49419 539 aaKnown RBP18.87■□□□□ 0.61
COMMD3-210ENST00000472610 COL19A1Q14993 1142 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 AMHR2Q16671 573 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 URGCPQ8TCY9 931 aa18.87■□□□□ 0.61
COMMD3-210ENST00000472610 MICAL1Q8TDZ2 1067 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms