RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 PNMA5Q96PV4 448 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 PLIN2Q99541 437 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 PLVAPQ9BX97 442 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 TMEM117Q9H0C3 514 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 ZSCAN16Q9H4T2 348 aaPredicted RBP10.15□□□□□ -0.78
SYN3-211ENST00000472027 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 TYW1Q9NV66 732 aaKnown RBP10.15□□□□□ -0.78
SYN3-211ENST00000472027 LRRIQ4A6NIV6 560 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 GRM6O15303 877 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 TSPAN1O60635 241 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 ZNF623O75123 536 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 HSP90AA1P07900 732 aaKnown RBP10.14□□□□□ -0.79
SYN3-211ENST00000472027 AXLP30530 894 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 CEBPZQ03701 1054 aaKnown RBP10.14□□□□□ -0.79
SYN3-211ENST00000472027 MBTD1Q05BQ5 628 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 PTPAQ15257 358 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 AMHR2Q16671 573 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 NAALADL2Q58DX5 795 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 CLLU1OSQ5K130 101 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 UBXN11Q5T124 520 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 LRRC55Q6ZSA7 311 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 KCNK18Q7Z418 384 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 CABP7Q86V35 215 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 ABI1Q8IZP0 508 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 KCTD17Q8N5Z5 321 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 BSNDQ8WZ55 320 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 LPPQ93052 612 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 P2RX5Q93086 422 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 MRPL38Q96DV4 380 aaKnown RBP10.14□□□□□ -0.79
SYN3-211ENST00000472027 CPB2Q96IY4 423 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
SYN3-211ENST00000472027 NT5C3AQ9H0P0 336 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 CWH43Q9H720 699 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 ALG13Q9NP73 1137 aaKnown RBP10.14□□□□□ -0.79
SYN3-211ENST00000472027 HCSTQ9UBK5 93 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 PLAGL2Q9UPG8 496 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 PCDHB2Q9Y5E7 798 aa10.14□□□□□ -0.79
SYN3-211ENST00000472027 MEIS3P2A8K0S8 358 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 OFD1O75665 1012 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 PDIA4P13667 645 aaKnown RBP10.13□□□□□ -0.79
SYN3-211ENST00000472027 LONP1P36776 959 aaKnown RBP10.13□□□□□ -0.79
SYN3-211ENST00000472027 UBA7P41226 1012 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 NAMPTP43490 491 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 RAB27AP51159 221 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
SYN3-211ENST00000472027 CDCA2Q69YH5 1023 aaPredicted RBP10.13□□□□□ -0.79
SYN3-211ENST00000472027 RINT1Q6NUQ1 792 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 NOTUMQ6P988 496 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 C1orf186Q6ZWK4 172 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 MRPL10Q7Z7H8 261 aaKnown RBP10.13□□□□□ -0.79
SYN3-211ENST00000472027 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 SYT2Q8N9I0 419 aaPredicted RBP10.13□□□□□ -0.79
SYN3-211ENST00000472027 KLHL23Q8NBE8 558 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 SPPL3Q8TCT6 385 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 HELQQ8TDG4 1101 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 KIFAP3Q92845 792 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 CDK5RAP3Q96JB5 506 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 IFT74Q96LB3 600 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 FZD8Q9H461 694 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 AAASQ9NRG9 546 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
SYN3-211ENST00000472027 ARID2Q68CP9 1835 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 A0A1B0GUA9 196 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 B4GALT5O43286 388 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 SLC26A4O43511 780 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 HIP1RO75146 1068 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 SSBP05455 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYN3-211ENST00000472027 ITGB1P05556 798 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 PLA2G4BP0C869 781 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 ARF4P18085 180 aaPredicted RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 LAG3P18627 525 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 DNAJB1P25685 340 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 MARCKSP29966 332 aaPredicted RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 SLC12A3P55017 1021 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 CAMK1Q14012 370 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 PPP2R5AQ15172 486 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 FAM187BQ17R55 369 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 TMEM119Q4V9L6 283 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 AGMOQ6ZNB7 445 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 DAW1Q8N136 415 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 LRRC43Q8N309 656 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 COLGALT1Q8NBJ5 622 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 SMG8Q8ND04 991 aaKnown RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 CNNM3Q8NE01 707 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 DEPTORQ8TB45 409 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 POF1BQ8WVV4 589 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 FOXD4L4Q8WXT5 416 aaPredicted RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 CALML4Q96GE6 196 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 USP28Q96RU2 1077 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 RUSC1Q9BVN2 902 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 EIF2AQ9BY44 585 aaKnown RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 CCSER1Q9C0I3 900 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 LMAN2LQ9H0V9 348 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms