RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CDCA2Q69YH5 1023 aaPredicted RBP21.13■□□□□ 0.97
PSPC1-203ENST00000471658 NME8Q8N427 588 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 GUF1Q8N442 669 aaKnown RBP21.13■□□□□ 0.97
PSPC1-203ENST00000471658 SCLT1Q96NL6 688 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 SEMA6BQ9H3T3 888 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 CTNND2Q9UQB3 1225 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 CD4P01730 458 aa21.12■□□□□ 0.97
PSPC1-203ENST00000471658 CTSHP09668 335 aa21.12■□□□□ 0.97
PSPC1-203ENST00000471658 THPOP40225 353 aa21.12■□□□□ 0.97
PSPC1-203ENST00000471658 NELFBQ8WX92 580 aa21.12■□□□□ 0.97
PSPC1-203ENST00000471658 OSMRQ99650 979 aa21.12■□□□□ 0.97
PSPC1-203ENST00000471658 GTPBP4Q9BZE4 634 aaKnown RBP21.12■□□□□ 0.97
PSPC1-203ENST00000471658 TBX20Q9UMR3 447 aa21.12■□□□□ 0.97
PSPC1-203ENST00000471658 TRIM49BA6NDI0 452 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 TTLL13PA6NNM8 815 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 K7ERI5 159 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 EIF3DO15371 548 aaKnown RBP eCLIP21.11■□□□□ 0.972e-6■■■■□ 22.9
PSPC1-203ENST00000471658 IQCF3P0C7M6 154 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 FGFR4P22455 802 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 MRPS6P82932 125 aaKnown RBP21.11■□□□□ 0.97
PSPC1-203ENST00000471658 TLE2Q04725 743 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 BMT2Q1RMZ1 405 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 LRRC26Q2I0M4 334 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 NECAB2Q7Z6G3 386 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 SEZ6LQ9BYH1 1024 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 KCTD10Q9H3F6 313 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 KCNG1Q9UIX4 513 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 CDY2AQ9Y6F7 541 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 ZMYM2Q9UBW7 1377 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 CHRNA1P02708 482 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 PHKA2P46019 1235 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 MBTD1Q05BQ5 628 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 POU5F1BQ06416 359 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 STIM1Q13586 685 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 SNX17Q15036 470 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 ANKRD40Q6AI12 368 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 RPAINQ86UA6 219 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 RSPH3Q86UC2 560 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 ZNF410Q86VK4 478 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 ZBTB8OSQ8IWT0 167 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 TMEM40Q8WWA1 233 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 DHTKD1Q96HY7 919 aaPredicted RBP21.11■□□□□ 0.97
PSPC1-203ENST00000471658 ACCSQ96QU6 501 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 CELF4Q9BZC1 486 aaKnown RBP21.11■□□□□ 0.97
PSPC1-203ENST00000471658 OSBPL7Q9BZF2 842 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 CCDC113Q9H0I3 377 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 TMEM134Q9H6X4 195 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 ATP11BQ9Y2G3 1177 aa21.11■□□□□ 0.97
PSPC1-203ENST00000471658 TISP43B9A030 160 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 INO80B-WBP1J3KQ70 363 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 ZNF165P49910 485 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 MGAT3Q09327 533 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 KNOP1Q1ED39 458 aaKnown RBP21.1■□□□□ 0.97
PSPC1-203ENST00000471658 CENPPQ6IPU0 288 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 STXBP4Q6ZWJ1 553 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 ANKRD33Q7Z3H0 272 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 UBE2Q1Q7Z7E8 422 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 IFNLR1Q8IU57 520 aaPredicted RBP21.1■□□□□ 0.97
PSPC1-203ENST00000471658 SLC17A8Q8NDX2 589 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 P2RX5Q93086 422 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 INO80BQ9C086 356 aaPredicted RBP21.1■□□□□ 0.97
PSPC1-203ENST00000471658 C2orf40Q9H1Z8 148 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 CBX8Q9HC52 389 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 DACH1Q9UI36 760 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 TRPV2Q9Y5S1 764 aa21.1■□□□□ 0.97
PSPC1-203ENST00000471658 ANKRD63C9JTQ0 380 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 PSMA7O14818 248 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 TGFB1I1O43294 461 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 PRKCBP05771 671 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 CAPN2P17655 700 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 CCNE1P24864 410 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 EFNA5P52803 228 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 CRYBB1P53674 252 aaPredicted RBP21.09■□□□□ 0.97
PSPC1-203ENST00000471658 FAAP100Q0VG06 881 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 PAK1Q13153 545 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 ALCAMQ13740 583 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 ZNF618Q5T7W0 954 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 MAP4K3Q8IVH8 894 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 RNF214Q8ND24 703 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 NFKBIZQ9BYH8 718 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 GCOM2Q9BZD3 368 aaPredicted RBP21.09■□□□□ 0.97
PSPC1-203ENST00000471658 FZD8Q9H461 694 aa21.09■□□□□ 0.97
PSPC1-203ENST00000471658 H0YCG3 227 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 CKBP12277 381 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 DARSP14868 501 aaKnown RBP21.08■□□□□ 0.97
PSPC1-203ENST00000471658 CDC42EP1Q00587 391 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 C1orf53Q5VUE5 145 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 SYCP3Q8IZU3 236 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 KCNN1Q92952 543 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 ABHD8Q96I13 439 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 RBSNQ9H1K0 784 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 RWDD2AQ9UIY3 292 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 UBE4BO95155 1302 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 PHLPP2Q6ZVD8 1323 aa21.08■□□□□ 0.97
PSPC1-203ENST00000471658 CLIC2O15247 247 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 B4GALT5O43286 388 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 KIF20AO95235 890 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 ERCC5P28715 1186 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 STRN3Q13033 797 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 IQCB1Q15051 598 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms