RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 APOA5Q6Q788 366 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 ZNF574Q6ZN55 896 aaPredicted RBP8.17□□□□□ -1.1
SMC5-202ENST00000471372 SPRED2Q7Z698 418 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 NLRX1Q86UT6 975 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 TICAM2Q86XR7 235 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 WFDC3Q8IUB2 231 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 NKAPQ8N5F7 415 aaKnown RBP8.17□□□□□ -1.1
SMC5-202ENST00000471372 RPGRQ92834 1020 aaKnown RBP8.17□□□□□ -1.1
SMC5-202ENST00000471372 C22orf23Q9BZE7 217 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 WDR12Q9GZL7 423 aaKnown RBP8.17□□□□□ -1.1
SMC5-202ENST00000471372 TNFRSF12AQ9NP84 129 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 KMT5AQ9NQR1 393 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 GPRC5BQ9NZH0 403 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 DTLQ9NZJ0 730 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 RBPJLQ9UBG7 517 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 CORO2BQ9UQ03 480 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 PCDHA13Q9Y5I0 950 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 F8W031 263 aaPredicted RBP8.16□□□□□ -1.1
SMC5-202ENST00000471372 LRG1P02750 347 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 TRHRP34981 398 aaPredicted RBP8.16□□□□□ -1.1
SMC5-202ENST00000471372 BTNL9Q6UXG8 535 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
SMC5-202ENST00000471372 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 GLB1L3Q8NCI6 653 aaPredicted RBP8.16□□□□□ -1.1
SMC5-202ENST00000471372 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
SMC5-202ENST00000471372 KIAA1191Q96A73 305 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 RGMAQ96B86 450 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 SCLT1Q96NL6 688 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 ADI1Q9BV57 179 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 SELENOOQ9BVL4 669 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 PITHD1Q9GZP4 211 aaPredicted RBP8.16□□□□□ -1.1
SMC5-202ENST00000471372 GREM2Q9H772 168 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 ARMT1Q9H993 441 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 ATP6V0A4Q9HBG4 840 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 INCENPQ9NQS7 918 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 SYNPO2Q9UMS6 1093 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 PCDHB1Q9Y5F3 818 aa8.16□□□□□ -1.1
SMC5-202ENST00000471372 LRRC14BA6NHZ5 514 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 RHPN2P1A8MT19 583 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 NCK2O43639 380 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 DYRK3O43781 588 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 TGFB1P01137 390 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 H2AFB1P0C5Y9 115 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 H2AFB2P0C5Z0 115 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 MYF5P13349 255 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 TNFSF4P23510 183 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.1
SMC5-202ENST00000471372 IL12RB1P42701 662 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 SARSP49591 514 aaKnown RBP8.15□□□□□ -1.1
SMC5-202ENST00000471372 CASP5P51878 434 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 RAB1AP62820 205 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 POLD3Q15054 466 aaPredicted RBP8.15□□□□□ -1.1
SMC5-202ENST00000471372 NR0B2Q15466 257 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 CCDC157Q569K6 752 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 CCDC174Q6PII3 467 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 PAF1Q8N7H5 531 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 CALML6Q8TD86 181 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 PHKBQ93100 1093 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 SHISA4Q96DD7 197 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 NOL10Q9BSC4 688 aaKnown RBP8.15□□□□□ -1.1
SMC5-202ENST00000471372 VPS11Q9H270 941 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 BCAS3Q9H6U6 928 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 ZMAT3Q9HA38 289 aaKnown RBP8.15□□□□□ -1.1
SMC5-202ENST00000471372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMC5-202ENST00000471372 FTSJ1Q9UET6 329 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 GPR160Q9UJ42 338 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 CDC23Q9UJX2 597 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 PCDHGB3Q9Y5G1 929 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 HCFC2Q9Y5Z7 792 aa8.15□□□□□ -1.1
SMC5-202ENST00000471372 CFAP20Q9Y6A4 193 aaKnown RBP8.15□□□□□ -1.1
SMC5-202ENST00000471372 A0A088AWK7 358 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 A0A0A6YYJ9 748 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 CYBBP04839 570 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 ABCB4P21439 1286 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 SDHBP21912 280 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 BTKQ06187 659 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 PAQR3Q6TCH7 311 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 MIGA2Q7L4E1 593 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 DPP9Q86TI2 863 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 ZNF354CQ86Y25 554 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 TOE1Q96GM8 510 aaKnown RBP8.14□□□□□ -1.11
SMC5-202ENST00000471372 CDK5RAP3Q96JB5 506 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 FDXACB1Q9BRP7 624 aaPredicted RBP8.14□□□□□ -1.11
SMC5-202ENST00000471372 ARFGAP3Q9NP61 516 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 DCP1AQ9NPI6 582 aaPredicted RBP8.14□□□□□ -1.11
SMC5-202ENST00000471372 C19orf73Q9NVV2 129 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 STAP2Q9UGK3 403 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 DBR1Q9UK59 544 aaKnown RBP8.14□□□□□ -1.11
SMC5-202ENST00000471372 LZTS1Q9Y250 596 aa8.14□□□□□ -1.11
SMC5-202ENST00000471372 ZNF839A8K0R7 811 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 HMGB1P1B2RPK0 211 aaPredicted RBP8.13□□□□□ -1.11
SMC5-202ENST00000471372 ZBTB7AO95365 584 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 PNLIPP16233 465 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 ARL4AP40617 200 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 STAT5AP42229 794 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 RENBPP51606 427 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 PFKPQ01813 784 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 SLC9A5Q14940 896 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 NOMO1Q15155 1222 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms