RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 C11orf16Q9NQ32 467 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 AGPAT5Q9NUQ2 364 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 HIDE1A8MVS5 230 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 EOMESO95936 686 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-203ENST00000471344 AFF1P51825 1210 aaKnown RBP17.13■□□□□ 0.33
COL1A1-203ENST00000471344 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
COL1A1-203ENST00000471344 NBR1Q14596 966 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 SMAD2Q15796 467 aaKnown RBP17.13■□□□□ 0.33
COL1A1-203ENST00000471344 OTUD6AQ7L8S5 288 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 SLC39A11Q8N1S5 342 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 ASAP3Q8TDY4 903 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
COL1A1-203ENST00000471344 MTRQ99707 1265 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 TCF25Q9BQ70 676 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 TLE6Q9H808 572 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 INPP5FQ9Y2H2 1132 aa17.13■□□□□ 0.33
COL1A1-203ENST00000471344 LYPLA2O95372 231 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 BCAR1P56945 870 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 PLCB3Q01970 1234 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 ZNF174Q15697 407 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 UBXN11Q5T124 520 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 BCL7CQ8WUZ0 217 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-203ENST00000471344 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
COL1A1-203ENST00000471344 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-203ENST00000471344 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 TBC1D13Q9NVG8 400 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 SPG21Q9NZD8 308 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 PPME1Q9Y570 386 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
COL1A1-203ENST00000471344 ZC3H11AO75152 810 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL1A1-203ENST00000471344 MED24O75448 989 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 OFD1O75665 1012 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 RARRES1P49788 294 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 CAPSQ13938 189 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL1A1-203ENST00000471344 DUSP6Q16828 381 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 AGMOQ6ZNB7 445 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 ADHFE1Q8IWW8 467 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 TCP11Q8WWU5 503 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 CPB2Q96IY4 423 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 LZTS1Q9Y250 596 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
COL1A1-203ENST00000471344 C19orf67A6NJJ6 358 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 PI4K2BG5E9Z4 385 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
COL1A1-203ENST00000471344 TSPAN1O60635 241 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
COL1A1-203ENST00000471344 EYA4O95677 639 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 PPM1AP35813 382 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 TECP42680 631 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 LLGL2Q6P1M3 1020 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 AUTS2Q8WXX7 1259 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 LRFN3Q9BTN0 628 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 C1QTNF1Q9BXJ1 281 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
COL1A1-203ENST00000471344 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
COL1A1-203ENST00000471344 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 FAM50BQ9Y247 325 aa17.1■□□□□ 0.33
COL1A1-203ENST00000471344 ZNF623O75123 536 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 GLRA2P23416 452 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 ARL2P36404 184 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 RAB27AP51159 221 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 PTENP60484 403 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 COASYQ13057 564 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 KCNC3Q14003 757 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 AMHR2Q16671 573 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 TTC38Q5R3I4 469 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 NOSTRINQ8IVI9 506 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 EXOC8Q8IYI6 725 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 ZSCAN31Q96LW9 406 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 APOL5Q9BWW9 433 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms