RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GOLGA8FQ08AF8 430 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 GOLGA8DPQ0D2H9 430 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 KCNH2Q12809 1159 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 CAPSQ13938 189 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 CCL14Q16627 93 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 DEFB115Q30KQ5 88 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 BRDTQ58F21 947 aaPredicted RBP10.27□□□□□ -0.77
VPS52-216ENST00000471309 IER5Q5VY09 327 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 PSPC1Q8WXF1 523 aaKnown RBP10.27□□□□□ -0.77
VPS52-216ENST00000471309 SLC35C1Q96A29 364 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 TMEM143Q96AN5 459 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 CAPNS2Q96L46 248 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 PCMTD1Q96MG8 357 aaPredicted RBP10.27□□□□□ -0.77
VPS52-216ENST00000471309 DNAJC7Q99615 494 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 EDEM3Q9BZQ6 932 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 HSPBP1Q9NZL4 362 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 CAPN11Q9UMQ6 739 aa10.27□□□□□ -0.77
VPS52-216ENST00000471309 GNEQ9Y223 722 aaKnown RBP10.27□□□□□ -0.77
VPS52-216ENST00000471309 TTC26A0AVF1 554 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 GTPBP10A4D1E9 387 aaKnown RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 LRRIQ4A6NIV6 560 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 TISP43B9A030 160 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 HNRNPDLO14979 420 aaKnown RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 EXOC3O60645 756 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 ZNF286BP0CG31 522 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 CYP2C19P33261 490 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 KRT9P35527 623 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 KLK7P49862 253 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 APLP1P51693 650 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 MCCD1P59942 119 aaPredicted RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 ZBED6P86452 979 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 BFSP1Q12934 665 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 STRN3Q13033 797 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 MXD4Q14582 209 aaPredicted RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 NOLC1Q14978 699 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS52-216ENST00000471309 DGKDQ16760 1214 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 DCAF17Q5H9S7 520 aaPredicted RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 CDCA2Q69YH5 1023 aaPredicted RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 SLC39A4Q6P5W5 647 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 TAS1R3Q7RTX0 852 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 TLK2Q86UE8 772 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 XXYLT1Q8NBI6 393 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 DEPTORQ8TB45 409 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 CPLX3Q8WVH0 158 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 CBWD1Q9BRT8 395 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 RNPEPQ9H4A4 650 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 LUC7L2Q9Y383 392 aaKnown RBP10.26□□□□□ -0.77
VPS52-216ENST00000471309 Q9Y3F1 56 aa10.26□□□□□ -0.77
VPS52-216ENST00000471309 ANKRD63C9JTQ0 380 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 H3BRB1 525 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 KIAA0391O15091 583 aaKnown RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 MAGEB2O15479 319 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 ADCY3O60266 1144 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 AOC2O75106 756 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 F2P00734 622 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 KRT13P13646 458 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 INSRRP14616 1297 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 GARTP22102 1010 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 CNGA1P29973 690 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 PSMC4P43686 418 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 EFNA5P52803 228 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 ENPEPQ07075 957 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 LAMTOR4Q0VGL1 99 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 KCNMA1Q12791 1236 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 DRP2Q13474 957 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 TFDP1Q14186 410 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 C17orf53Q8N3J3 647 aaPredicted RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 ZNF397Q8NF99 534 aaPredicted RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 OR8K1Q8NGG5 319 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 CCDC113Q9H0I3 377 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 C2orf40Q9H1Z8 148 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 TUT1Q9H6E5 874 aaKnown RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 MMRN2Q9H8L6 949 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 FAM207AQ9NSI2 230 aaPredicted RBP10.25□□□□□ -0.77
VPS52-216ENST00000471309 STYXL1Q9Y6J8 313 aa10.25□□□□□ -0.77
VPS52-216ENST00000471309 K7ERI5 159 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 ASAP2O43150 1006 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CCP110O43303 1012 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CAPN15O75808 1086 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CYBAP13498 195 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 AKR1A1P14550 325 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 ADSSP30520 456 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 HNRNPH3P31942 346 aaKnown RBP10.24□□□□□ -0.77
VPS52-216ENST00000471309 LIG4P49917 911 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CPT1AP50416 773 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 SNRNP35Q16560 246 aaKnown RBP10.24□□□□□ -0.77
VPS52-216ENST00000471309 MEA1Q16626 185 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 PRAMEF19Q5SWL8 479 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 E4F1Q66K89 784 aaPredicted RBP10.24□□□□□ -0.77
VPS52-216ENST00000471309 ZPBP2Q6X784 338 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms