RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 PRKCEQ02156 737 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 PUM1Q14671 1186 aaKnown RBP eCLIP12.74□□□□□ -0.37
MRPL40-203ENST00000471259 PRR16Q569H4 304 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 CWF19L1Q69YN2 538 aaKnown RBP12.74□□□□□ -0.37
MRPL40-203ENST00000471259 DGLUCYQ7Z3D6 616 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 CMASQ8NFW8 434 aaPredicted RBP12.74□□□□□ -0.37
MRPL40-203ENST00000471259 RIT2Q99578 217 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 TMEM175Q9BSA9 504 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
MRPL40-203ENST00000471259 CNTNAP2Q9UHC6 1331 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 SPTBN4Q9H254 2564 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 DKC1O60832 514 aaKnown RBP eCLIP12.73□□□□□ -0.37
MRPL40-203ENST00000471259 GAS7O60861 476 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 NR1I2O75469 434 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 C1RP00736 705 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 URODP06132 367 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 CIITAP33076 1130 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 KRT32Q14532 448 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
MRPL40-203ENST00000471259 XKR3Q5GH77 459 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 HINFPQ9BQA5 517 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 TEKT3Q9BXF9 490 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 NRDE2Q9H7Z3 1164 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 UBN1Q9NPG3 1134 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 FAM105AQ9NUU6 356 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 TBC1D13Q9NVG8 400 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 CDH22Q9UJ99 828 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
MRPL40-203ENST00000471259 INPP5FQ9Y2H2 1132 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 FAN1Q9Y2M0 1017 aa12.73□□□□□ -0.37
MRPL40-203ENST00000471259 SRFP11831 508 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
MRPL40-203ENST00000471259 USP11P51784 963 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 CLCN4P51793 760 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 NECTIN1Q15223 517 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
MRPL40-203ENST00000471259 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 HDAC7Q8WUI4 952 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 CRYGNQ8WXF5 182 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 SHDQ96IW2 340 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 KLHL5Q96PQ7 755 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 GBP3Q9H0R5 595 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 SMOC2Q9H3U7 446 aa12.72□□□□□ -0.37
MRPL40-203ENST00000471259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.72□□□□□ -0.37
MRPL40-203ENST00000471259 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
MRPL40-203ENST00000471259 PI15O43692 258 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 NPR3P17342 541 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 NCBP1Q09161 790 aaKnown RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 MIER3Q7Z3K6 550 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 GPR161Q8N6U8 529 aaKnown RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 AUTS2Q8WXX7 1259 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 RUBCNQ92622 972 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 NIFKQ9BYG3 293 aaKnown RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 PLEKHA4Q9H4M7 779 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 PPME1Q9Y570 386 aa12.71□□□□□ -0.37
MRPL40-203ENST00000471259 ZFP37Q9Y6Q3 630 aaPredicted RBP12.71□□□□□ -0.37
MRPL40-203ENST00000471259 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 A0A087WZ62 844 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 CCDC195A0A1B0GUA6 201 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 OFD1O75665 1012 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 GLUD1P00367 558 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 SOD2P04179 222 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 CNPP09543 421 aaKnown RBP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 FGFR4P22455 802 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 CREMQ03060 361 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 FUT2Q10981 343 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 PCBP1Q15365 356 aaKnown RBP eCLIP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 MTERF2Q49AM1 385 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 RHPN2Q8IUC4 686 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 SECISBP2LQ93073 1101 aaKnown RBP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 FDXACB1Q9BRP7 624 aaPredicted RBP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 RSAD1Q9HA92 442 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 PIDD1Q9HB75 910 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 MAN1C1Q9NR34 630 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 SUCLA2Q9P2R7 463 aaPredicted RBP12.7□□□□□ -0.38
MRPL40-203ENST00000471259 EPS15L1Q9UBC2 864 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 SIT1Q9Y3P8 196 aa12.7□□□□□ -0.38
MRPL40-203ENST00000471259 CLUHO75153 1309 aa12.69□□□□□ -0.38
MRPL40-203ENST00000471259 INPPL1O15357 1258 aa12.69□□□□□ -0.38
MRPL40-203ENST00000471259 CHMP2AO43633 222 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms