RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	ZNF865	P0CJ78	1059 aa	Predicted RBP	28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	CTGF	P29279	349 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	ZBED6	P86452	979 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	CCL14	Q16627	93 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	DCAF17	Q5H9S7	520 aa	Predicted RBP	28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	ZNF484	Q5JVG2	852 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	CCAR2	Q8N163	923 aa	Known RBP	28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	XXYLT1	Q8NBI6	393 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	DEPTOR	Q8TB45	409 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	AGPAT5	Q9NUQ2	364 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	MAPK13	O15264	365 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	ADCY6	O43306	1168 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	MMP3	P08254	477 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	CNGA1	P29973	690 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	C16orf70	Q9BSU1	422 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	EDEM3	Q9BZQ6	932 aa		28.38	■■■□□ 2.13
U2AF1-208	ENST00000471250	MKRN4P	Q13434	485 aa	Predicted RBP	28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	DRP2	Q13474	957 aa		28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	BRDT	Q58F21	947 aa	Predicted RBP	28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	TCERG1L	Q5VWI1	586 aa		28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	NEK11	Q8NG66	645 aa		28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	FAM207A	Q9NSI2	230 aa	Predicted RBP	28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	GNE	Q9Y223	722 aa	Known RBP	28.37	■■■□□ 2.13
U2AF1-208	ENST00000471250	LRRIQ4	A6NIV6	560 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	EPHB6	O15197	1021 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	ADSS	P30520	456 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	CAPS	Q13938	189 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	DEFB115	Q30KQ5	88 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	SLC39A4	Q6P5W5	647 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	TMTC1	Q8IUR5	882 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	REM2	Q8IYK8	340 aa	Predicted RBP	28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	ZNF397	Q8NF99	534 aa	Predicted RBP	28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	TMEM134	Q9H6X4	195 aa		28.36	■■■□□ 2.13
U2AF1-208	ENST00000471250	CYP2C19	P33261	490 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	TRAPPC12	Q8WVT3	735 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	PRPF31	Q8WWY3	499 aa	Known RBP	28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	LSM14B	Q9BX40	385 aa	Known RBP	28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	SUGCT	Q9HAC7	445 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	ZNF215	Q9UL58	517 aa	Predicted RBP	28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	USP27X	A6NNY8	438 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	AOC2	O75106	756 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	ZNF286B	P0CG31	522 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	FCGRT	P55899	365 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	BFSP1	Q12934	665 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	STRN3	Q13033	797 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	MXD4	Q14582	209 aa	Predicted RBP	28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	DGKD	Q16760	1214 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	RDH13	Q8NBN7	331 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	PSPC1	Q8WXF1	523 aa	Known RBP	28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	CAPNS2	Q96L46	248 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	COL1A2	P08123	1366 aa		28.35	■■■□□ 2.13
U2AF1-208	ENST00000471250	GTPBP10	A4D1E9	387 aa	Known RBP	28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	SOWAHD	A6NJG2	315 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	ADCY3	O60266	1144 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	KRT13	P13646	458 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	INSRR	P14616	1297 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	GART	P22102	1010 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	MCCD1	P59942	119 aa	Predicted RBP	28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	TSR1	Q2NL82	804 aa	Known RBP	28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	CYP26C1	Q6V0L0	522 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	INTS8	Q75QN2	995 aa	Known RBP	28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	LRRC71	Q8N4P6	559 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250	CRACR2A	Q9BSW2	395 aa		28.34	■■■□□ 2.13
U2AF1-208	ENST00000471250		H3BRB1	525 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250		K7ERI5	159 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	DYNC1LI2	O43237	492 aa	Predicted RBP	28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	NOL4	O94818	638 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	C22orf31	O95567	290 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	PIGR	P01833	764 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	MEA1	Q16626	185 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	TUT1	Q9H6E5	874 aa	Known RBP	28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	CREBZF	Q9NS37	354 aa		28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	TRMT1	Q9NXH9	659 aa	Known RBP	28.33	■■■□□ 2.13
U2AF1-208	ENST00000471250	PHLPP2	Q6ZVD8	1323 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	HNRNPDL	O14979	420 aa	Known RBP	28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	CCP110	O43303	1012 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	PSMC4	P43686	418 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	LAMTOR4	Q0VGL1	99 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	RAD9B	Q6WBX8	426 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	BICD1	Q96G01	975 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	PLCB1	Q9NQ66	1216 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	CEP72	Q9P209	647 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	SUCLA2	Q9P2R7	463 aa	Predicted RBP	28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250		A6NJR5	290 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	MAGEB2	O15479	319 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	LACTB	P83111	547 aa	Predicted RBP	28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	EXOC3L4	Q17RC7	722 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	DPY19L2P1	Q6NXN4	242 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	EFCAB12	Q6NXP0	572 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	WDR59	Q6PJI9	974 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	GBP6	Q6ZN66	633 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	ZSWIM2	Q8NEG5	633 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	POMGNT1	Q8WZA1	660 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	BAP1	Q92560	729 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	STYXL1	Q9Y6J8	313 aa		28.32	■■■□□ 2.12
U2AF1-208	ENST00000471250	OFD1	O75665	1012 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	HNRNPH3	P31942	346 aa	Known RBP	28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	FMO5	P49326	533 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	LIG4	P49917	911 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	EFNA5	P52803	228 aa		28.31	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms