RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 DHCR24Q15392 516 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 MIIPQ5JXC2 388 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 C1QL3Q5VWW1 255 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 ESPNLQ6ZVH7 1005 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 CMIPQ8IY22 773 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 D2HGDHQ8N465 521 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 VPS11Q9H270 941 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 IL23AQ9NPF7 189 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 LY86O95711 162 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 POU3F3P20264 500 aaPredicted RBP7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 ACRV1P26436 265 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 HSD3B2P26439 372 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 LSP1P33241 339 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 GAGE13Q4V321 117 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 Q6ZRM9 215 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 LHFPL2Q6ZUX7 228 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 PASD1Q8IV76 773 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 SLC16A11Q8NCK7 471 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 CLRN3Q8NCR9 226 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 FAM126AQ9BYI3 521 aaPredicted RBP7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 VTA1Q9NP79 307 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 TOPORSQ9NS56 1045 aaPredicted RBP7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 CEP72Q9P209 647 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 EVLQ9UI08 416 aaPredicted RBP7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 NUMBLQ9Y6R0 609 aa7.14□□□□□ -1.27
PRPF40A-206ENST00000471167 A0A1W2PR48 441 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 IGSF3O75054 1194 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 EYA4O95677 639 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 HIBADHP31937 336 aaKnown RBP7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 SCNN1GP51170 649 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 PTTG1IPP53801 180 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 DDB1Q16531 1140 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 ATP13A4Q4VNC1 1196 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 PITRM1Q5JRX3 1037 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 FNDC7Q5VTL7 733 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 FAM111BQ6SJ93 734 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 RASSF3Q86WH2 238 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 MSL3Q8N5Y2 521 aaKnown RBP7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 CACTINQ8WUQ7 758 aaKnown RBP7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 USP18Q9UMW8 372 aa7.13□□□□□ -1.27
PRPF40A-206ENST00000471167 FSHBP01225 129 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 SLPIP03973 132 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 RABGGTBP53611 331 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 OCRLQ01968 901 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 SART3Q15020 963 aaKnown RBP7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 NRN1LQ496H8 165 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 FRMD7Q6ZUT3 714 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 SGMS1Q86VZ5 419 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 AFAP1L2Q8N4X5 818 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 GAB3Q8WWW8 586 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 FAM89AQ96GI7 184 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 MPHOSPH9Q99550 1183 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 PRSS50Q9UI38 385 aa7.12□□□□□ -1.27
PRPF40A-206ENST00000471167 KDM1AO60341 852 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 JUNP05412 331 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 STRN3Q13033 797 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 RRP1BQ14684 758 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 CT83Q5H943 113 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 C1orf210Q8IVY1 113 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 UNC5BQ8IZJ1 945 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 CMTM4Q8IZR5 234 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 LILRA3Q8N6C8 439 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 CDYL2Q8N8U2 506 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 HIST1H2AHQ96KK5 128 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 HIST1H2AJQ99878 128 aa7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 ZNF703Q9H7S9 590 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 C14orf93Q9H972 538 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-206ENST00000471167 CAPN14A8MX76 684 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 NPIPB8E9PQR5 432 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 MTSS1O43312 755 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 LPLP06858 475 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 SLC25A3Q00325 362 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 FAM214AQ32MH5 1076 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 DDX46Q7L014 1031 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 TMPRSS6Q8IU80 811 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 TCF25Q9BQ70 676 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 IFT22Q9H7X7 185 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 SYNPO2Q9UMS6 1093 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 EDARQ9UNE0 448 aa7.1□□□□□ -1.27
PRPF40A-206ENST00000471167 KLRG2A4D1S0 409 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 GOLGA8BA8MQT2 603 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 DAPK3O43293 454 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 NARSO43776 548 aaKnown RBP7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 TMEM127O75204 238 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 ALDH1A2O94788 518 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 FSBPO95073 299 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 CSRP2Q16527 193 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 CCDC62Q6P9F0 684 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 TAS1R1Q7RTX1 841 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 ELOA2Q8IYF1 753 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 FERMT2Q96AC1 680 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 ZNF512Q96ME7 567 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 UIMC1Q96RL1 719 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 CAAP1Q9H8G2 361 aa7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 TMA7Q9Y2S6 64 aaKnown RBP7.09□□□□□ -1.27
PRPF40A-206ENST00000471167 GRXCR1A8MXD5 290 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 ZEB2O60315 1214 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 VIL1P09327 827 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms