RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SLC16A4O15374 487 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 TRAK2O60296 914 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 ACRP10323 421 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 NCKAP1LP55160 1127 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 EHHADHQ08426 723 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 COASYQ13057 564 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 PPIGQ13427 754 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMC1A-206ENST00000470241 PNOCQ13519 176 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 POSTNQ15063 836 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 AMHR2Q16671 573 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
SMC1A-206ENST00000470241 ODR4Q5SWX8 454 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 ZBTB8OSQ8IWT0 167 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 DBF4BQ8NFT6 615 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 DEPTORQ8TB45 409 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 KCNN1Q92952 543 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 HPS3Q969F9 1004 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 CCDC113Q9H0I3 377 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 C2orf40Q9H1Z8 148 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 FZD8Q9H461 694 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 SEL1LQ9UBV2 794 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 KCNG1Q9UIX4 513 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 ST3GAL5Q9UNP4 418 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
SMC1A-206ENST00000470241 INO80B-WBP1J3KQ70 363 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 GPR182O15218 404 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 EDN1P05305 212 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 PFKMP08237 780 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 MAPTP10636 758 aaKnown RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 SFPQP23246 707 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 NMT1P30419 496 aaKnown RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 SMTNP53814 917 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 PAK2Q13177 524 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 KMT5BQ4FZB7 885 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 TAS1R3Q7RTX0 852 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 RPUSD2Q8IZ73 545 aaKnown RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 SEPT8Q92599 483 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 ERCC4Q92889 916 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 GDF15Q99988 308 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 FGFBP2Q9BYJ0 223 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 INO80BQ9C086 356 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-206ENST00000470241 TMEM134Q9H6X4 195 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 OLFML3Q9NRN5 406 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 TBC1D7Q9P0N9 293 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 LOXHD1Q8IVV2 1947 aa11.64□□□□□ -0.55
SMC1A-206ENST00000470241 DNAH12Q6ZR08 3092 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 DENND3A2RUS2 1198 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 K7ENM7 598 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 B4GALT5O43286 388 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 TSPAN1O60635 241 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 PPP1R37O75864 691 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 RPN1P04843 607 aaKnown RBP11.63□□□□□ -0.55
SMC1A-206ENST00000470241 EFNA5P52803 228 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 DSC3Q14574 896 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 MAPK6Q16659 721 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 FAM187BQ17R55 369 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 TMEM240Q5SV17 173 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 CNKSR3Q6P9H4 555 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 ZNF365Q70YC5 407 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 CATSPER4Q7RTX7 472 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 ZNF720Q7Z2F6 126 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 SPATA20Q8TB22 786 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 APBB2Q92870 758 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 STRA6Q9BX79 667 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 CLSTN2Q9H4D0 955 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 ST6GALNAC4Q9H4F1 302 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 MRPL44Q9H9J2 332 aaKnown RBP11.63□□□□□ -0.55
SMC1A-206ENST00000470241 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 PRMT7Q9NVM4 692 aaPredicted RBP11.63□□□□□ -0.55
SMC1A-206ENST00000470241 USP20Q9Y2K6 914 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
SMC1A-206ENST00000470241 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 EVPLQ92817 2033 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 H0YCG3 227 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 K7ERI5 159 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 ACKR2O00590 384 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 MGEA5O60502 916 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 MBD3O95983 291 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 PRKCBP05771 671 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 MYBP10242 640 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 HOXA11P31270 313 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 SARSP49591 514 aaKnown RBP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 CASP5P51878 434 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 GTF2BQ00403 316 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 PCBP1Q15365 356 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 CAMK4Q16566 473 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms