RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 STAT1P42224 750 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 POLR2FP61218 127 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 STRN3Q13033 797 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 VSIG10LQ86VR7 867 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 TRPM4Q8TD43 1214 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 TCHPQ9BT92 498 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 CCDC169A6NNP5 214 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 EML1O00423 815 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 MIIPQ5JXC2 388 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 APLFQ8IW19 511 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 CALR3Q96L12 384 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 CAPS2Q9BXY5 557 aa7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 UTP11Q9Y3A2 253 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-215ENST00000470056 GRIN3BO60391 1043 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 GFPT2O94808 682 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 RHOXF2BP0C7M4 288 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 PSMC6P62333 389 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 NCAPG2Q86XI2 1143 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 CEP170P1Q96L14 293 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 RHOXF2Q9BQY4 288 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 UNCXA6NJT0 531 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 PHACTR2O75167 634 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 MATR3P43243 847 aaKnown RBP eCLIP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 ZNF131P52739 623 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 XKR3Q5GH77 459 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 UBL4BQ8N7F7 174 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 MSANTD4Q8NCY6 345 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 ACRBPQ8NEB7 543 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SENP7Q9BQF6 1050 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 KCTD10Q9H3F6 313 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SCN9AQ15858 1988 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 LRRC53A6NM62 1247 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 ITGB5P18084 799 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 BRD2P25440 801 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 KIF11P52732 1056 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SMCR8Q8TEV9 937 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 KIAA1586Q9HCI6 787 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 CCDC14Q49A88 953 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 ZNF720Q7Z2F6 126 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 DDX41Q9UJV9 622 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 FBXL5Q9UKA1 691 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 LOC102724159A0A0B4J2E5 919 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 PWP2Q15269 919 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC30A10Q6XR72 485 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 ZC3H3Q8IXZ2 948 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 LRRC15Q8TF66 581 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC7A3Q8WY07 619 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 MCUR1Q96AQ8 359 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 CYP2J2P51589 502 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SEL1L2Q5TEA6 688 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 SEPT14Q6ZU15 432 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 XXYLT1Q8NBI6 393 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 UPF1Q92900 1129 aaKnown RBP eCLIP7.56□□□□□ -1.22e-10■■□□□ 13.5
GAPVD1-215ENST00000470056 INPP4AQ96PE3 977 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 GBP5Q96PP8 586 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 AFG3L2Q9Y4W6 797 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 MAPK13O15264 365 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 EDIL3O43854 480 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 MYBP10242 640 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 MYL7Q01449 175 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 ARSHQ5FYA8 562 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 DHX37Q8IY37 1157 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 GCNT4Q9P109 453 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 PCDHA2Q9Y5H9 948 aa7.56□□□□□ -1.2
GAPVD1-215ENST00000470056 EPM2AIP1Q7L775 607 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 NLGN2Q8NFZ4 835 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 DTNBP1Q96EV8 351 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 NLRC4Q9NPP4 1024 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 KMT5AQ9NQR1 393 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SIK3Q9Y2K2 1263 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 ERVK-24P63145 666 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 MXRA7P84157 204 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 MUM1L1Q5H9M0 696 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 EEF2KMTQ96G04 330 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 CARD6Q9BX69 1037 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 ADAMTSL1Q8N6G6 1762 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 LRRD1A4D1F6 860 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 RFC5P40937 340 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 PPIL2Q13356 520 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 RIOX2Q8IUF8 465 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SPIRE2Q8WWL2 714 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 ST6GALNAC4Q9H4F1 302 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SPDYE16A6NNV3 312 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 PRPF4BQ13523 1007 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 ALS2CLQ60I27 953 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 KLHL14Q9P2G3 628 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 MRFAP1Q9Y605 127 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 POLGP54098 1239 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 RTP1P59025 263 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 DRP2Q13474 957 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 HAUS6Q7Z4H7 955 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 FHDC1Q9C0D6 1143 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 MLXIPQ9HAP2 919 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 ZNF302Q9NR11 478 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms