RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 BANK1Q8NDB2 785 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 PRMT6Q96LA8 375 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-209ENST00000470026 CSRNP1Q96S65 589 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 AGPAT1Q99943 283 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 MRPL11Q9Y3B7 192 aaKnown RBP14.78□□□□□ -0.04
BRCA1-209ENST00000470026 PFASO15067 1338 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 PMM2O15305 246 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 HIP1RO75146 1068 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 BCRP11274 1271 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 VCAM1P19320 739 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 SEC24CP53992 1094 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 EIF3BP55884 814 aaKnown RBP14.78□□□□□ -0.04
BRCA1-209ENST00000470026 ALCAMQ13740 583 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 DHX34Q14147 1143 aaKnown RBP14.78□□□□□ -0.04
BRCA1-209ENST00000470026 STYK1Q6J9G0 422 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 ACER1Q8TDN7 264 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 TLCD1Q96CP7 247 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 ERP44Q9BS26 406 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 LXNQ9BS40 222 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 ZNF577Q9BSK1 485 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 TEKT3Q9BXF9 490 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 C5orf60A6NFR6 353 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 TRAPPC3O43617 180 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 EXOC3O60645 756 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 MTA2O94776 668 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 MMP10P09238 476 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 ABCB4P21439 1286 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 PPP2R2AP63151 447 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 DHX9Q08211 1270 aaKnown RBP14.77□□□□□ -0.04
BRCA1-209ENST00000470026 EPC2Q52LR7 807 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 INTS8Q75QN2 995 aaKnown RBP14.77□□□□□ -0.04
BRCA1-209ENST00000470026 CNPY4Q8N129 248 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 CHURC1Q8WUH1 139 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 UBLCP1Q8WVY7 318 aaPredicted RBP14.77□□□□□ -0.04
BRCA1-209ENST00000470026 ALG3Q92685 438 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 EPB41L4BQ9H329 900 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 GOPCQ9HD26 462 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 BRWD3Q6RI45 1802 aa14.77□□□□□ -0.04
BRCA1-209ENST00000470026 PSME4Q14997 1843 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 MIF4GDA9UHW6 222 aaKnown RBP14.77□□□□□ -0.05
BRCA1-209ENST00000470026 MAPK13O15264 365 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 NUDT17P0C025 328 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 HSPA6P17066 643 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 C1orf220Q5T0J3 134 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 FMO2Q99518 471 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 MXRA8Q9BRK3 442 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 TRIM51Q9BSJ1 452 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 TMEM206Q9H813 350 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRCA1-209ENST00000470026 ERVK-5Q9HDB9 667 aa14.77□□□□□ -0.05
BRCA1-209ENST00000470026 CNOT8Q9UFF9 292 aaKnown RBP14.77□□□□□ -0.05
BRCA1-209ENST00000470026 GOLGA6L10A0A0M3HER8 536 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 ARHGEF35A5YM69 484 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 HPDP32754 393 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-209ENST00000470026 DR1Q01658 176 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 MMS22LQ6ZRQ5 1243 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
BRCA1-209ENST00000470026 ZNF622Q969S3 477 aaKnown RBP eCLIP14.76□□□□□ -0.055e-8■■■□□ 17.3
BRCA1-209ENST00000470026 HOOK2Q96ED9 719 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 RPS6KC1Q96S38 1066 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 ST6GALNAC4Q9H4F1 302 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 ALG6Q9Y672 507 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 RPTORQ8N122 1335 aa14.76□□□□□ -0.05
BRCA1-209ENST00000470026 IPO5O00410 1097 aaKnown RBP14.75□□□□□ -0.05
BRCA1-209ENST00000470026 KIAA0391O15091 583 aaKnown RBP14.75□□□□□ -0.05
BRCA1-209ENST00000470026 PTGIRP43119 386 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 HSD17B4P51659 736 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 DLG4P78352 724 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 PPP3CAQ08209 521 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ARHGAP44Q17R89 818 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 MEX3CQ5U5Q3 659 aaKnown RBP14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ICE2Q659A1 982 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 CCDC174Q6PII3 467 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 NIPA1Q7RTP0 329 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 FAM160B2Q86V87 743 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 OTUD6BQ8N6M0 293 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 SLC20A1Q8WUM9 679 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 CYFIP2Q96F07 1278 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 DPH5Q9H2P9 285 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 PCYOX1Q9UHG3 505 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 DBR1Q9UK59 544 aaKnown RBP14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ZNF536O15090 1300 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 EMSYQ7Z589 1322 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 E7EVH7 732 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 KIAA0754O94854 1291 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 GGPS1O95749 300 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ALAS1P13196 640 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 KRT13P13646 458 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 CTNNA2P26232 953 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 VAMP7P51809 220 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 SNRPFP62306 86 aaKnown RBP14.75□□□□□ -0.05
BRCA1-209ENST00000470026 UBXN2AP68543 259 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 DRP2Q13474 957 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 PADI6Q6TGC4 694 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 JAMLQ86YT9 394 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ARHGEF19Q8IW93 802 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms