RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 RSAD2Q8WXG1 361 aa20.57■□□□□ 0.88
TTC28-205ENST00000469670 FAM105AQ9NUU6 356 aa20.57■□□□□ 0.88
TTC28-205ENST00000469670 PIN4Q9Y237 131 aaKnown RBP20.57■□□□□ 0.88
TTC28-205ENST00000469670 A0A087WZ62 844 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 GOLGA8AA7E2F4 631 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 GOLGA8BA8MQT2 603 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 B4GALT3O60512 393 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 LILRB3O75022 631 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 CIITAP33076 1130 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 NONOQ15233 471 aaKnown RBP eCLIP20.56■□□□□ 0.88
TTC28-205ENST00000469670 TARBP2Q15633 366 aaKnown RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 PFKFB3Q16875 520 aaPredicted RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 ZNF280BQ86YH2 543 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 REXO1Q8N1G1 1221 aaKnown RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 CMASQ8NFW8 434 aaPredicted RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 RIN2Q8WYP3 895 aaPredicted RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 LENG9Q96B70 501 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 FDXACB1Q9BRP7 624 aaPredicted RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 ZMYND12Q9H0C1 365 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 FAM217BQ9NTX9 383 aaPredicted RBP20.56■□□□□ 0.88
TTC28-205ENST00000469670 WDR87Q6ZQQ6 2873 aa20.56■□□□□ 0.88
TTC28-205ENST00000469670 ESYT2A0FGR8 921 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 ZNF623O75123 536 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 CDC27P30260 824 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 GBP2P32456 591 aaPredicted RBP20.55■□□□□ 0.88
TTC28-205ENST00000469670 RAB27AP51159 221 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 TCEANC2Q96MN5 208 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 INO80BQ9C086 356 aaPredicted RBP20.55■□□□□ 0.88
TTC28-205ENST00000469670 TBC1D17Q9HA65 648 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 C6orf50Q9HD87 102 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 MAN1C1Q9NR34 630 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 MRPL17Q9NRX2 175 aaKnown RBP20.55■□□□□ 0.88
TTC28-205ENST00000469670 CA14Q9ULX7 337 aa20.55■□□□□ 0.88
TTC28-205ENST00000469670 MYH9P35579 1960 aaKnown RBP20.54■□□□□ 0.88
TTC28-205ENST00000469670 CHMP2AO43633 222 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 PUM1Q14671 1186 aaKnown RBP eCLIP20.54■□□□□ 0.88
TTC28-205ENST00000469670 MTERF2Q49AM1 385 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 SLC44A3Q8N4M1 653 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 URGCPQ8TCY9 931 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 STAMQ92783 540 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 PGBD4Q96DM1 585 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 HINFPQ9BQA5 517 aa20.54■□□□□ 0.88
TTC28-205ENST00000469670 WDR6Q9NNW5 1121 aaKnown RBP20.54■□□□□ 0.88
TTC28-205ENST00000469670 SEPT9Q9UHD8 586 aaPredicted RBP20.54■□□□□ 0.88
TTC28-205ENST00000469670 DNAH14Q0VDD8 3507 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 CCDC195A0A1B0GUA6 201 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 MSH4O15457 936 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 DDHD2O94830 711 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 SRFP11831 508 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 SFNP31947 248 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 DNM2P50570 870 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 JAK3P52333 1124 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
TTC28-205ENST00000469670 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 ZC3H14Q6PJT7 736 aaKnown RBP20.53■□□□□ 0.88
TTC28-205ENST00000469670 CATSPER4Q7RTX7 472 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 ZNF410Q86VK4 478 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 ESYT1Q9BSJ8 1104 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 NIFKQ9BYG3 293 aaKnown RBP20.53■□□□□ 0.88
TTC28-205ENST00000469670 EPS15L1Q9UBC2 864 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 FAN1Q9Y2M0 1017 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 CLUHO75153 1309 aa20.53■□□□□ 0.88
TTC28-205ENST00000469670 DMXL1Q9Y485 3027 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 IGKV6-21A0A0C4DH24 114 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 KLF18A0A0U1RQI7 1052 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 C2CD2LO14523 706 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 GAS7O60861 476 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 ALDH2P05091 517 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 DCNP07585 359 aaKnown RBP20.52■□□□□ 0.88
TTC28-205ENST00000469670 CYP26C1Q6V0L0 522 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 AGMOQ6ZNB7 445 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 RHPN2Q8IUC4 686 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 CCDC12Q8WUD4 166 aaPredicted RBP20.52■□□□□ 0.88
TTC28-205ENST00000469670 NXPE3Q969Y0 559 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 FAM193BQ96PV7 902 aaPredicted RBP20.52■□□□□ 0.88
TTC28-205ENST00000469670 MYADMQ96S97 322 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 CEP89Q96ST8 783 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 RIT2Q99578 217 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 TMEM175Q9BSA9 504 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 RHOBTB2Q9BYZ6 727 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 UNC45AQ9H3U1 944 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 ANO2Q9NQ90 1003 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 SUCLA2Q9P2R7 463 aaPredicted RBP20.52■□□□□ 0.88
TTC28-205ENST00000469670 PCDHB2Q9Y5E7 798 aa20.52■□□□□ 0.88
TTC28-205ENST00000469670 TMEM150BA6NC51 233 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 INPPL1O15357 1258 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 SOD2P04179 222 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 URODP06132 367 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 ADH1AP07327 375 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 SP9P0CG40 484 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 GNA11P29992 359 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 ADD1P35611 737 aaKnown RBP20.51■□□□□ 0.87
TTC28-205ENST00000469670 AK2P54819 239 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 XKR3Q5GH77 459 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 LRCH2Q5VUJ6 765 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 PHLDB3Q6NSJ2 640 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 ELMSAN1Q6PJG2 1045 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 DHX32Q7L7V1 743 aaKnown RBP20.51■□□□□ 0.87
TTC28-205ENST00000469670 GPR152Q8TDT2 470 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 RUBCNQ92622 972 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms