RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TBC1D13Q9NVG8 400 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ZFHX2Q9C0A1 2572 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 EML1O00423 815 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 BRD1O95696 1058 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 CA8P35219 290 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 MTHFRP42898 656 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-207ENST00000469093 PSMC5P62195 406 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 MTMR3Q13615 1198 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
COL5A1-207ENST00000469093 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 GLB1LQ6UWU2 654 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 RUFY3Q7L099 469 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 UBALD2Q8IYN6 164 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-207ENST00000469093 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
COL5A1-207ENST00000469093 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 FAM86C1Q9NVL1 165 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 LIMD1Q9UGP4 676 aa13.75□□□□□ -0.21
COL5A1-207ENST00000469093 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
COL5A1-207ENST00000469093 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-207ENST00000469093 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 B4GALT3O60512 393 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 DEXIO95424 95 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 EPCAMP16422 314 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 GIT2Q14161 759 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 PLA2G4FQ68DD2 849 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 ZNF280BQ86YH2 543 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 ZDHHC14Q8IZN3 488 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
COL5A1-207ENST00000469093 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 DAGLBQ8NCG7 672 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 FEZF2Q8TBJ5 459 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-207ENST00000469093 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-207ENST00000469093 NLRP4Q96MN2 994 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 AIFM3Q96NN9 605 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 VN1R3Q9BXE9 311 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 IRF2BPLQ9H1B7 796 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 SMOC2Q9H3U7 446 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 CYP26B1Q9NR63 512 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 DNAJB4Q9UDY4 337 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 INPP5FQ9Y2H2 1132 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
COL5A1-207ENST00000469093 H0Y858 1186 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 CPLX1O14810 134 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 SLC37A4O43826 429 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 ST18O60284 1047 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 REC8O95072 547 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 ASGR2P07307 311 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 QARSP47897 775 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 SLC11A1P49279 550 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 RAB27AP51159 221 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 NUBP1P53384 320 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 NPEPPSP55786 919 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 INF2Q27J81 1249 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 KIAA1841Q6NSI8 718 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 AGMOQ6ZNB7 445 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 MRPL10Q7Z7H8 261 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 DZANK1Q9NVP4 752 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 DDX25Q9UHL0 483 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 DBR1Q9UK59 544 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 USTQ9Y2C2 406 aa13.73□□□□□ -0.21
COL5A1-207ENST00000469093 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
COL5A1-207ENST00000469093 LILRB3O75022 631 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 DDHD2O94830 711 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 ALDH2P05091 517 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 HOXA11P31270 313 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-207ENST00000469093 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 TMC5Q6UXY8 1006 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 CABP7Q86V35 215 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-207ENST00000469093 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 TDRD5Q8NAT2 981 aaKnown RBP13.72□□□□□ -0.21
COL5A1-207ENST00000469093 PRPF31Q8WWY3 499 aaKnown RBP13.72□□□□□ -0.21
COL5A1-207ENST00000469093 KLHL5Q96PQ7 755 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 GBP3Q9H0R5 595 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 MINDY3Q9H8M7 445 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 WRAP73Q9P2S5 460 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-207ENST00000469093 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 KCNJ14Q9UNX9 436 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
COL5A1-207ENST00000469093 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-207ENST00000469093 GFRA3O60609 400 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 SRGAP2CP0DJJ0 459 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 PTPN14Q15678 1187 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms