RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 TMEM31Q5JXX7 168 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 ADHFE1Q8IWW8 467 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 RNF149Q8NC42 400 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 C8orf76Q96K31 380 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 CCDC43Q96MW1 224 aaKnown RBP11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 HSD17B14Q9BPX1 270 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 LRFN3Q9BTN0 628 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 FAM105AQ9NUU6 356 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 CLEC1BQ9P126 229 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 PRKAG3Q9UGI9 489 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 PPME1Q9Y570 386 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 MEIS3P2A8K0S8 358 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 ASAP2O43150 1006 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 ZC3H11AO75152 810 aaKnown RBP eCLIP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 ALADP13716 330 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 PPM1AP35813 382 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 BCAR1P56945 870 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 ZP2Q05996 745 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 SMAD4Q13485 552 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 ZNF174Q15697 407 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 SMAD2Q15796 467 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 LLGL2Q6P1M3 1020 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 GLB1LQ6UWU2 654 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 FAM184AQ8NB25 1140 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 TMEM87AQ8NBN3 555 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 PIGOQ8TEQ8 1089 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 PGBD4Q96DM1 585 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 MTMR9Q96QG7 549 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 MTRQ99707 1265 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 MRPL9Q9BYD2 267 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 GBP3Q9H0R5 595 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 TMEM60Q9H2L4 133 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 NGRNQ9NPE2 291 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 LZTS1Q9Y250 596 aa11.86□□□□□ -0.51
TGFBR3-205ENST00000468996 HIDE1A8MVS5 230 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 FSCN2O14926 492 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 ZNF623O75123 536 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 OFD1O75665 1012 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 ERLIN2O94905 339 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 CXCL14O95715 111 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 TECP42680 631 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 RAB27AP51159 221 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 MXD4Q14582 209 aaPredicted RBP11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 DUSP6Q16828 381 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 NOMO2Q5JPE7 1267 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 MAEAQ7L5Y9 396 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 SLC39A11Q8N1S5 342 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 TMEM169Q96HH4 297 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 APOL5Q9BWW9 433 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 ANKEF1Q9NU02 776 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 AGPAT5Q9NUQ2 364 aa11.85□□□□□ -0.51
TGFBR3-205ENST00000468996 WDR81Q562E7 1941 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 POTEMA6NI47 508 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 INO80B-WBP1J3KQ70 363 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 GAS2O43903 313 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 GPR37L1O60883 481 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 LYPLA2O95372 231 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 EYA4O95677 639 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 GLP2RO95838 553 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 HOXA11P31270 313 aaPredicted RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 RBM25P49756 843 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 COASYQ13057 564 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 TFDP1Q14186 410 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 BMS1Q14692 1282 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 MRPL43Q8N983 215 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 VN1R2Q8NFZ6 395 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 URGCPQ8TCY9 931 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 CDCA3Q99618 268 aaPredicted RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 NRDE2Q9H7Z3 1164 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 XPNPEP1Q9NQW7 623 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 TBC1D13Q9NVG8 400 aa11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 USP15Q9Y4E8 981 aaPredicted RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 FNDC1Q4ZHG4 1894 aaPredicted RBP11.84□□□□□ -0.51
TGFBR3-205ENST00000468996 DCXO43602 365 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 DGAT1O75907 488 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 POMCP01189 267 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 ALDH2P05091 517 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 SRGAP2BP0DMP2 458 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 ITGA4P13612 1032 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 PTENP60484 403 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 HMGN5P82970 282 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 SMC1AQ14683 1233 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 MRPL10Q7Z7H8 261 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 CATSPER3Q86XQ3 398 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms