RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CNGA1P29973 690 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 XXYLT1Q8NBI6 393 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 NEK11Q8NG66 645 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 OR8K1Q8NGG5 319 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 TTYH3Q9C0H2 523 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 HSPBP1Q9NZL4 362 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 A0A1W2PQJ5 194 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 ANKRD63C9JTQ0 380 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 DYNC1LI2O43237 492 aaPredicted RBP20.74■□□□□ 0.91
SMC4-209ENST00000468653 MMP3P08254 477 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 CTGFP29279 349 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 PSMC4P43686 418 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 DRP2Q13474 957 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 DGKDQ16760 1214 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 ZNF484Q5JVG2 852 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 TRAPPC12Q8WVT3 735 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 PRPF31Q8WWY3 499 aaKnown RBP20.74■□□□□ 0.91
SMC4-209ENST00000468653 PSPC1Q8WXF1 523 aaKnown RBP20.74■□□□□ 0.91
SMC4-209ENST00000468653 SLC35C1Q96A29 364 aa20.74■□□□□ 0.91
SMC4-209ENST00000468653 IGKV6-21A0A0C4DH24 114 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 K7ERI5 159 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 HNRNPDLO14979 420 aaKnown RBP20.73■□□□□ 0.91
SMC4-209ENST00000468653 ADCY6O43306 1168 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 ZNF865P0CJ78 1059 aaPredicted RBP20.73■□□□□ 0.91
SMC4-209ENST00000468653 KRT13P13646 458 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 ZBED6P86452 979 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 KCNMA1Q12791 1236 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 CAPSQ13938 189 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 MXD4Q14582 209 aaPredicted RBP20.73■□□□□ 0.91
SMC4-209ENST00000468653 BRDTQ58F21 947 aaPredicted RBP20.73■□□□□ 0.91
SMC4-209ENST00000468653 TAS1R3Q7RTX0 852 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 REM2Q8IYK8 340 aaPredicted RBP20.73■□□□□ 0.91
SMC4-209ENST00000468653 LRRC71Q8N4P6 559 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 C16orf70Q9BSU1 422 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 CRACR2AQ9BSW2 395 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 CREBZFQ9NS37 354 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 AGPAT5Q9NUQ2 364 aa20.73■□□□□ 0.91
SMC4-209ENST00000468653 H3BRB1 525 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 INSRRP14616 1297 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 IGBP1P78318 339 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 DNAJC7Q99615 494 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 LSM14BQ9BX40 385 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 TUT1Q9H6E5 874 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 TRMT1Q9NXH9 659 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 SUCLA2Q9P2R7 463 aaPredicted RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 HOXD8P13378 290 aaPredicted RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 LIG4P49917 911 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 LACTBP83111 547 aaPredicted RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 LAMTOR4Q0VGL1 99 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 E4F1Q66K89 784 aaPredicted RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 EFCAB12Q6NXP0 572 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 INTS8Q75QN2 995 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 TMTC1Q8IUR5 882 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 CCAR2Q8N163 923 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 METTL13Q8N6R0 699 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 POMGNT1Q8WZA1 660 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 KCNN1Q92952 543 aa20.72■□□□□ 0.91
SMC4-209ENST00000468653 ZNHIT6Q9NWK9 470 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 GNEQ9Y223 722 aaKnown RBP20.72■□□□□ 0.91
SMC4-209ENST00000468653 ADCY3O60266 1144 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 FECHP22830 423 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 ADSSP30520 456 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 BFSP1Q12934 665 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 MKRN4PQ13434 485 aaPredicted RBP20.71■□□□□ 0.91
SMC4-209ENST00000468653 CYP26C1Q6V0L0 522 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 TLK2Q86UE8 772 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 ARHGAP39Q9C0H5 1083 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 TMEM134Q9H6X4 195 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 KCND1Q9NSA2 647 aa20.71■□□□□ 0.91
SMC4-209ENST00000468653 GOLGA8IPA6NC78 632 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 SOWAHDA6NJG2 315 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 GOLGA8JA6NMD2 632 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 EPHB6O15197 1021 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 MAPK13O15264 365 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 SLC39A4Q6P5W5 647 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 GBP6Q6ZN66 633 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 CACNA2D4Q7Z3S7 1137 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 EDEM3Q9BZQ6 932 aa20.7■□□□□ 0.9
SMC4-209ENST00000468653 COL1A2P08123 1366 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 PHLPP2Q6ZVD8 1323 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 USP27XA6NNY8 438 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 MAGEB2O15479 319 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 CCP110O43303 1012 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 C22orf31O95567 290 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 SRGAP2CP0DJJ0 459 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 GARTP22102 1010 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 KLRC1P26715 233 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 APLP1P51693 650 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 VAMP7P51809 220 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 EFNA5P52803 228 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 EXOC3L4Q17RC7 722 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 DNTTIP2Q5QJE6 756 aaKnown RBP20.69■□□□□ 0.9
SMC4-209ENST00000468653 RHPN2Q8IUC4 686 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 SAAL1Q96ER3 474 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 AP5M1Q9H0R1 490 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 GTPBP10A4D1E9 387 aaKnown RBP20.69■□□□□ 0.9
SMC4-209ENST00000468653 A6NJR5 290 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 TRIM49P0CI25 452 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms