RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ASTLQ6HA08 431 aaPredicted RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 DDX53Q86TM3 631 aaKnown RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
TSSC4-208ENST00000467308 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 DBR1Q9UK59 544 aaKnown RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.66■□□□□ 0.42
TSSC4-208ENST00000467308 DENND4AQ7Z401 1863 aa17.66■□□□□ 0.42
TSSC4-208ENST00000467308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.65■□□□□ 0.42
TSSC4-208ENST00000467308 NT5C1B-RDH14C9J2C7 533 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 MSH4O15457 936 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 GAS7O60861 476 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 ZC3H11AO75152 810 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSSC4-208ENST00000467308 SKIP12755 728 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 FGFR4P22455 802 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 CA8P35219 290 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 USP11P51784 963 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 CLCN5P51795 746 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 FOXK2Q01167 660 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 ST3GAL1Q11201 340 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 SCRN1Q12765 414 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 UGCGQ16739 394 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 RDM1Q8NG50 284 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 IGSF21Q96ID5 467 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 NIFKQ9BYG3 293 aaKnown RBP17.65■□□□□ 0.42
TSSC4-208ENST00000467308 LIMD1Q9UGP4 676 aa17.65■□□□□ 0.42
TSSC4-208ENST00000467308 ASGR2P07307 311 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
TSSC4-208ENST00000467308 WEE2P0C1S8 567 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 SFPQP23246 707 aaKnown RBP eCLIP17.64■□□□□ 0.41
TSSC4-208ENST00000467308 GLB1LQ6UWU2 654 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 PPFIBP1Q86W92 1011 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 TMEM173Q86WV6 379 aaPredicted RBP17.64■□□□□ 0.41
TSSC4-208ENST00000467308 C12orf76Q8N812 135 aaPredicted RBP17.64■□□□□ 0.41
TSSC4-208ENST00000467308 CCDC148Q8NFR7 591 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 SLC22A17Q8WUG5 538 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 SLC5A5Q92911 643 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 SMOC2Q9H3U7 446 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 STK39Q9UEW8 545 aa17.64■□□□□ 0.41
TSSC4-208ENST00000467308 IGKV6-21A0A0C4DH24 114 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 PRR23AA6NEV1 266 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 EDIL3O43854 480 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 ZNF623O75123 536 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 CSDE1O75534 798 aaKnown RBP17.63■□□□□ 0.41
TSSC4-208ENST00000467308 GALTP07902 379 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 EPCAMP16422 314 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 DDIT3P35638 169 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 DNM2P50570 870 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 AKAP17AQ02040 695 aaKnown RBP17.63■□□□□ 0.41
TSSC4-208ENST00000467308 DRP2Q13474 957 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 LRCH2Q5VUJ6 765 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 TWF2Q6IBS0 349 aaKnown RBP17.63■□□□□ 0.41
TSSC4-208ENST00000467308 ASCL5Q7RTU5 278 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 CABP7Q86V35 215 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 ZNF410Q86VK4 478 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 CEP89Q96ST8 783 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 TEKT3Q9BXF9 490 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 INO80BQ9C086 356 aaPredicted RBP17.63■□□□□ 0.41
TSSC4-208ENST00000467308 UNC45AQ9H3U1 944 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 MFSD1Q9H3U5 465 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 NRDE2Q9H7Z3 1164 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 CYP26B1Q9NR63 512 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 TBC1D13Q9NVG8 400 aa17.63■□□□□ 0.41
TSSC4-208ENST00000467308 CHMP2AO43633 222 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 RAB27AP51159 221 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 STK3Q13188 491 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 XKR3Q5GH77 459 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 NOMO2Q5JPE7 1267 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 AUTS2Q8WXX7 1259 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 ACSF2Q96CM8 615 aaPredicted RBP17.62■□□□□ 0.41
TSSC4-208ENST00000467308 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
TSSC4-208ENST00000467308 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 FAM105AQ9NUU6 356 aa17.62■□□□□ 0.41
TSSC4-208ENST00000467308 SEPT9Q9UHD8 586 aaPredicted RBP17.62■□□□□ 0.41
TSSC4-208ENST00000467308 A0A087WZ62 844 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 OFD1O75665 1012 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 PSMD10O75832 226 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 CDKL5O76039 1030 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 STBD1O95210 358 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 PDIA4P13667 645 aaKnown RBP17.61■□□□□ 0.41
TSSC4-208ENST00000467308 PTPN14Q15678 1187 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 KANK3Q6NY19 840 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 CPLX2Q6PUV4 134 aaKnown RBP17.61■□□□□ 0.41
TSSC4-208ENST00000467308 TMC5Q6UXY8 1006 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 GPR149Q86SP6 731 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 BCL7CQ8WUZ0 217 aaPredicted RBP17.61■□□□□ 0.41
TSSC4-208ENST00000467308 LPPQ93052 612 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 PHKBQ93100 1093 aa17.61■□□□□ 0.41
TSSC4-208ENST00000467308 FDXACB1Q9BRP7 624 aaPredicted RBP17.61■□□□□ 0.41
TSSC4-208ENST00000467308 PIN4Q9Y237 131 aaKnown RBP17.61■□□□□ 0.41
TSSC4-208ENST00000467308 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
TSSC4-208ENST00000467308 IFNAR1P17181 557 aa17.6■□□□□ 0.41
TSSC4-208ENST00000467308 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
TSSC4-208ENST00000467308 HMGN5P82970 282 aaKnown RBP17.6■□□□□ 0.41
TSSC4-208ENST00000467308 RNASELQ05823 741 aaKnown RBP17.6■□□□□ 0.41
TSSC4-208ENST00000467308 NTRK3Q16288 839 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms