RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 OR10A5Q9H207 317 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13A-209ENST00000467124 SIRT5Q9NXA8 310 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 TAGLN3Q9UI15 199 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 CDC42EP3Q9UKI2 254 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 DENND2AQ9ULE3 1009 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 TPP1O14773 563 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 PQBP1O60828 265 aaKnown RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 UBXN7O94888 489 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 ATF2P15336 505 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 RHCEP18577 417 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 APEX1P27695 318 aaKnown RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 SRSF3P84103 164 aaKnown RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 RHDQ02161 417 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 RTP5Q14D33 572 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 KIAA0753Q2KHM9 967 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 CCDC178Q5BJE1 867 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 CYB5RLQ6IPT4 315 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 CXXC5Q7LFL8 322 aaKnown RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 CDYL2Q8N8U2 506 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 DTX3Q8N9I9 347 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 GLB1L3Q8NCI6 653 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 OR5AN1Q8NGI8 311 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 SMARCC2Q8TAQ2 1214 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 LIN37Q96GY3 246 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 CGRRF1Q99675 332 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 B3GNT5Q9BYG0 378 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 ARMT1Q9H993 441 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 DCP1AQ9NPI6 582 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-209ENST00000467124 SYNPO2Q9UMS6 1093 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 IPPQ9Y573 584 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 PCDHA5Q9Y5H7 936 aa5.21□□□□□ -1.58
VPS13A-209ENST00000467124 A0A0A6YYJ9 748 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 N4BP3O15049 544 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 HNRNPLP14866 589 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 XPAP23025 273 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 IGFBP6P24592 240 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 ADSLP30566 484 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 GPR15P49685 360 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 MAP3K12Q12852 859 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 MALLQ13021 153 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 SMAD4Q13485 552 aaKnown RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 STILQ15468 1287 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 LONRF1Q17RB8 773 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 WDR72Q3MJ13 1102 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 CCDC157Q569K6 752 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 MUM1L1Q5H9M0 696 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 DPP8Q6V1X1 898 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 LDHDQ86WU2 507 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 DENND1CQ8IV53 801 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 SAMD3Q8N6K7 520 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 FBXO18Q8NFZ0 1043 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 FATE1Q969F0 183 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 NT5C1BQ96P26 610 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 NOX5Q96PH1 765 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 DIRC2Q96SL1 478 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 GORASP1Q9BQQ3 440 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 LRFN3Q9BTN0 628 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 BTBD2Q9BX70 525 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 SGPP1Q9BX95 441 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 NSUN3Q9H649 340 aaKnown RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 STAP2Q9UGK3 403 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 MBD1Q9UIS9 605 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-209ENST00000467124 FBXO10Q9UK96 956 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 PHTF1Q9UMS5 762 aa5.2□□□□□ -1.58
VPS13A-209ENST00000467124 A0A0A6YYK5 440 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 B3GALT2O43825 422 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 DTNBO60941 627 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 TUSC2O75896 110 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 HTR1BP28222 390 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 MCAMP43121 646 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 LIMS1P48059 325 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 STAT5BP51692 787 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 PPP3CAQ08209 521 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 NFATC3Q12968 1075 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 SAFB2Q14151 953 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 GJC2Q5T442 439 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 KANK2Q63ZY3 851 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 BTNL9Q6UXG8 535 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 NPNTQ6UXI9 565 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 OTOP2Q7RTS6 562 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 MORC1Q86VD1 984 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 FAM129CQ86XR2 697 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 RHOT1Q8IXI2 618 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 PRR18Q8N4B5 295 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 TTLL6Q8N841 843 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 MARCH10Q8NA82 808 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 FBXO15Q8NCQ5 510 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 MZB1Q8WU39 189 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 TTC17Q96AE7 1141 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 C1GALT1C1Q96EU7 318 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 DYDC2Q96IM9 177 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 HIST1H2AHQ96KK5 128 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 CLIC6Q96NY7 704 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 FAM193BQ96PV7 902 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 HIST1H2AJQ99878 128 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 SOX7Q9BT81 388 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 NAA15Q9BXJ9 866 aaKnown RBP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 PITHD1Q9GZP4 211 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms