RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 HGSNATQ68CP4 663 aa19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 CCDC65Q8IXS2 484 aa19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 RBM12BQ8IXT5 1001 aaKnown RBP19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 RNF10Q8N5U6 811 aaKnown RBP19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 ZNF317Q96PQ6 595 aaPredicted RBP19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 NT5C3AQ9H0P0 336 aa19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 WDR35Q9P2L0 1181 aa19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 ASB3Q9Y575 518 aa19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 MYH7BA7E2Y1 1941 aa19.5■□□□□ 0.71
SNAPC3-205ENST00000467062 HNRNPH3P31942 346 aaKnown RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 SLC12A3P55017 1021 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 KLHDC7AQ5VTJ3 777 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 NUGGCQ68CJ6 796 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 PDXDC1Q6P996 788 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 ZNF526Q8TF50 670 aaPredicted RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 MKL1Q969V6 931 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 IFT74Q96LB3 600 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 LRRC27Q9C0I9 530 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 NYAP2Q9P242 653 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 CLRN2A0PK11 232 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 LCA5LO95447 670 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 SPATA31C1P0DKV0 1188 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 SPIRE1Q08AE8 756 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 DYNC1I2Q13409 638 aaKnown RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 SGSM1Q2NKQ1 1148 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 PPP1R15BQ5SWA1 713 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 FBXO11Q86XK2 927 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 ETNPPLQ8TBG4 499 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 UBLCP1Q8WVY7 318 aaPredicted RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 LENG9Q96B70 501 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 DHX36Q9H2U1 1008 aaKnown RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 KCTD10Q9H3F6 313 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 SUDS3Q9H7L9 328 aaPredicted RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 SCAF8Q9UPN6 1271 aaKnown RBP19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 C2CD2Q9Y426 696 aa19.49■□□□□ 0.71
SNAPC3-205ENST00000467062 TCP10L2B9ZVM9 353 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 PJA2O43164 708 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 CHMP2AO43633 222 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 PYGBP11216 843 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 USP11P51784 963 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 NCALDP61601 193 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 KIAA1755Q5JYT7 1200 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 NCAPG2Q86XI2 1143 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 PIGOQ8TEQ8 1089 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 REEP2Q9BRK0 252 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 NSRP1Q9H0G5 558 aaKnown RBP19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 AGAP1Q9UPQ3 857 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 MYO3BQ8WXR4 1341 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 LTBP1Q14766 1721 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 IGF2BP3O00425 579 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 RAD51CO43502 376 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 MYBP10242 640 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 TRADDQ15628 312 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 PTPROQ16827 1216 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 KRT71Q3SY84 523 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 STRIP1Q5VSL9 837 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 FAM133AQ8N9E0 248 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 PRCCQ92733 491 aaPredicted RBP19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 CSRNP1Q96S65 589 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 BHMT2Q9H2M3 363 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 ECT2Q9H8V3 914 aa19.48■□□□□ 0.71
SNAPC3-205ENST00000467062 NR2F2P24468 414 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 RNASE9P60153 205 aaKnown RBP19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 RAPGEF1Q13905 1077 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 HYIQ5T013 277 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 TATDN1Q6P1N9 297 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 SFR1Q86XK3 245 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 GBP7Q8N8V2 638 aaPredicted RBP19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 DCAF4Q8WV16 495 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 AKT1S1Q96B36 256 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 ADAMTS1Q9UHI8 967 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 LRRC42Q9Y546 428 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 PDLIM1O00151 329 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 EML1O00423 815 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 WFS1O76024 890 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 RARAP10276 462 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 MTA1Q13330 715 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 GIT2Q14161 759 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 TRIM68Q6AZZ1 485 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 ANO7Q6IWH7 933 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 APBB1IPQ7Z5R6 666 aaPredicted RBP19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 CDAN1Q8IWY9 1227 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 ACER1Q8TDN7 264 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 KLHL29Q96CT2 875 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 PACSIN1Q9BY11 444 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 RAB17Q9H0T7 212 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 PACSIN2Q9UNF0 486 aaPredicted RBP19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 KDM3AQ9Y4C1 1321 aa19.47■□□□□ 0.71
SNAPC3-205ENST00000467062 MSH4O15457 936 aa19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 HIP1RO75146 1068 aa19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 CFBP00751 764 aa19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 HOXD13P35453 343 aa19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 ZNF76P36508 570 aa19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 MSH2P43246 934 aa19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 ASTE1Q2TB18 679 aaPredicted RBP19.46■□□□□ 0.71
SNAPC3-205ENST00000467062 CMPK2Q5EBM0 449 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms