RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 TRAPPC10P48553 1259 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 EMC2Q15006 297 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 SLC39A14Q15043 492 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 STK38Q15208 465 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 NEK9Q8TD19 979 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 PPP2R3CQ969Q6 453 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 NECAB3Q96P71 396 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-207ENST00000466829 MTMR9Q96QG7 549 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 MTRQ99707 1265 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 TMEM117Q9H0C3 514 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 TMEM60Q9H2L4 133 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 DHX33Q9H6R0 707 aaKnown RBP17.8■□□□□ 0.44
COL16A1-207ENST00000466829 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
COL16A1-207ENST00000466829 MORC2Q9Y6X9 1032 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-207ENST00000466829 A0A0U1RQF3 1178 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 POTEMA6NI47 508 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 TECP42680 631 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 TTC38Q5R3I4 469 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 SYAP1Q96A49 352 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-207ENST00000466829 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.79■□□□□ 0.44
COL16A1-207ENST00000466829 CLIC4Q9Y696 253 aa17.79■□□□□ 0.44
COL16A1-207ENST00000466829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-207ENST00000466829 H3BQ06 376 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-207ENST00000466829 SPTLC2O15270 562 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 ASAP2O43150 1006 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 NCK2O43639 380 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 PPP6R2O75170 966 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 EOMESO95936 686 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 BMP15O95972 392 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 OR52Z1P0C646 297 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 SKIP12755 728 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 LAG3P18627 525 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 CEBPZQ03701 1054 aaKnown RBP17.78■□□□□ 0.44
COL16A1-207ENST00000466829 SF3A1Q15459 793 aaKnown RBP17.78■□□□□ 0.44
COL16A1-207ENST00000466829 LONRF3Q496Y0 759 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 COLGALT1Q8NBJ5 622 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 ERMNQ8TAM6 284 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 SPPL3Q8TCT6 385 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 PIGOQ8TEQ8 1089 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 HSD17B14Q9BPX1 270 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 ANKEF1Q9NU02 776 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 HCSTQ9UBK5 93 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 LOXHD1Q8IVV2 1947 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 MYH15Q9Y2K3 1946 aa17.78■□□□□ 0.44
COL16A1-207ENST00000466829 A0A087WWV3 80 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 FGF18O76093 207 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 TOB1P50616 345 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-207ENST00000466829 ADALQ6DHV7 355 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 LRRC43Q8N309 656 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 HELQQ8TDG4 1101 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 PABPC5Q96DU9 382 aaKnown RBP17.77■□□□□ 0.44
COL16A1-207ENST00000466829 CASD1Q96PB1 797 aa17.77■□□□□ 0.44
COL16A1-207ENST00000466829 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.44
COL16A1-207ENST00000466829 REV3LO60673 3130 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 A0A1W2PQ27 194 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 A0A1W2PQ64 194 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 A0A1W2PQD8 194 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 DGAT1O75907 488 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 ERLIN2O94905 339 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 LYPLA2O95372 231 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 DNAJB1P25685 340 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 PHKA2P46019 1235 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 NCBP1Q09161 790 aaKnown RBP17.76■□□□□ 0.43
COL16A1-207ENST00000466829 HYAL1Q12794 435 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 ORC2Q13416 577 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-207ENST00000466829 TFDP1Q14186 410 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 MXD4Q14582 209 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-207ENST00000466829 PTPAQ15257 358 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 LEXMQ3ZCV2 418 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 PTCRAQ6ISU1 281 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-207ENST00000466829 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
COL16A1-207ENST00000466829 ZNF558Q96NG5 402 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 XIRP2A4UGR9 3374 aa17.76■□□□□ 0.43
COL16A1-207ENST00000466829 USO1O60763 962 aaKnown RBP17.75■□□□□ 0.43
COL16A1-207ENST00000466829 IRS1P35568 1242 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 ME1P48163 572 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 RAB27AP51159 221 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 KRT17Q04695 432 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 CLLU1OSQ5K130 101 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
COL16A1-207ENST00000466829 GLB1LQ6UWU2 654 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 MAEAQ7L5Y9 396 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 LPPQ93052 612 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 MRPL9Q9BYD2 267 aaKnown RBP17.75■□□□□ 0.43
COL16A1-207ENST00000466829 CWH43Q9H720 699 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 TUFT1Q9NNX1 390 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 TLR9Q9NR96 1032 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 FAM105AQ9NUU6 356 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 PCDHA7Q9UN72 937 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 FAM50BQ9Y247 325 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 INPP5FQ9Y2H2 1132 aa17.75■□□□□ 0.43
COL16A1-207ENST00000466829 RALGAPA2Q2PPJ7 1873 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms