RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CLRN3Q8NCR9 226 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 SH3RF3Q8TEJ3 882 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 WNT8AQ9H1J5 351 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 C14orf93Q9H972 538 aaKnown RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 KCNG1Q9UIX4 513 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 PRKAB1Q9Y478 270 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 NUMBLQ9Y6R0 609 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 BRINP1O60477 761 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 SEC24DO94855 1032 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-203ENST00000466732 GAAP10253 952 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 KIR2DL3P43628 341 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 GPR15P49685 360 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 SESN3P58005 492 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 CD69Q07108 199 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 PDCD1Q15116 288 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 SPDYAQ5MJ70 313 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 KRT40Q6A162 431 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 GAREM2Q75VX8 874 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 SPRED1Q7Z699 444 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 ZNF808Q8N4W9 903 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-203ENST00000466732 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 FAM89AQ96GI7 184 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 UIMC1Q96RL1 719 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 PRDM12Q9H4Q4 367 aa5.49□□□□□ -1.53
VPS13D-203ENST00000466732 TOPORSQ9NS56 1045 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-203ENST00000466732 UBE2QL1A1L167 161 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 MATN3O15232 486 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 EYA4O95677 639 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 LY86O95711 162 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 JUNP05412 331 aaKnown RBP5.48□□□□□ -1.53
VPS13D-203ENST00000466732 CNGA1P29973 690 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 PPARAQ07869 468 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 TRIM25Q14258 630 aaKnown RBP5.48□□□□□ -1.53
VPS13D-203ENST00000466732 STAT4Q14765 748 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 CCDC178Q5BJE1 867 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 CCDC62Q6P9F0 684 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 LYSMD2Q8IV50 215 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 SLC41A1Q8IVJ1 513 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 UNC5BQ8IZJ1 945 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 D2HGDHQ8N465 521 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 PIK3C3Q8NEB9 887 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 FDXACB1Q9BRP7 624 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-203ENST00000466732 TLR9Q9NR96 1032 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 PRSS50Q9UI38 385 aa5.48□□□□□ -1.53
VPS13D-203ENST00000466732 NRP2O60462 931 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 TNFRSF1AP19438 455 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 XPAP23025 273 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-203ENST00000466732 CT83Q5H943 113 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 PITRM1Q5JRX3 1037 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 LHFPL2Q6ZUX7 228 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 SGMS1Q86VZ5 419 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 RSAD2Q8WXG1 361 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 MPHOSPH9Q99550 1183 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 TCF25Q9BQ70 676 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 IL23AQ9NPF7 189 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 ING3Q9NXR8 418 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 EVLQ9UI08 416 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-203ENST00000466732 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 SH3BP1Q9Y3L3 701 aa5.47□□□□□ -1.53
VPS13D-203ENST00000466732 MTSS1O43312 755 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 ALDH1A2O94788 518 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 LPLP06858 475 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 CPEP16870 476 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 NRG3P56975 720 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 TMPRSS15P98073 1019 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 HHEXQ03014 270 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 MGAT5Q09328 741 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 SPTY2D1Q68D10 685 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-203ENST00000466732 FAM111BQ6SJ93 734 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 CMTM4Q8IZR5 234 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 OR14C36Q8NHC7 312 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 EAF2Q96CJ1 260 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-203ENST00000466732 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-203ENST00000466732 KCTD10Q9H3F6 313 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 NCDNQ9UBB6 729 aa5.46□□□□□ -1.54
VPS13D-203ENST00000466732 A0A1W2PR48 441 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 GPR39O43194 453 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-203ENST00000466732 HIBADHP31937 336 aaKnown RBP5.45□□□□□ -1.54
VPS13D-203ENST00000466732 LGALS4P56470 323 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 FSCN1Q16658 493 aaKnown RBP5.45□□□□□ -1.54
VPS13D-203ENST00000466732 UGT8Q16880 541 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 IQSEC1Q6DN90 963 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 LMBR1LQ6UX01 489 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 TAS1R1Q7RTX1 841 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 GLB1L2Q8IW92 636 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 ACAP3Q96P50 834 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 VTA1Q9NP79 307 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 HECAQ9UBI9 543 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-203ENST00000466732 CDY2AQ9Y6F7 541 aa5.45□□□□□ -1.54
VPS13D-203ENST00000466732 CADPSQ9ULU8 1353 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 PLSCR1O15162 318 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 ENPP1P22413 925 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 ACRV1P26436 265 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 NPEPPSP55786 919 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 SPIDRQ14159 915 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 USP39Q53GS9 565 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms