RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 CATSPER4Q7RTX7 472 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 TMEM87AQ8NBN3 555 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 ZHX3Q9H4I2 956 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 LARSQ9P2J5 1176 aaKnown RBP15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 KCNG1Q9UIX4 513 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 SLC4A7Q9Y6M7 1214 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 ENPP3O14638 875 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 ACTN4O43707 911 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 MGEA5O60502 916 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 KCNJ6P48051 423 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 ZNF131P52739 623 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 WDR5P61964 334 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 MBTD1Q05BQ5 628 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 LONRF3Q496Y0 759 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 RTN4RL1Q86UN2 441 aaPredicted RBP15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 MYCT1Q8N699 235 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 SPIRE2Q8WWL2 714 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 DNAJC19Q96DA6 116 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 NTPCRQ9BSD7 190 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 KIFC3Q9BVG8 833 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 PARVGQ9HBI0 331 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 KMT5AQ9NQR1 393 aa15.96■□□□□ 0.15
DNMT3A-208ENST00000466601 ADGRA3Q8IWK6 1321 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 DENND3A2RUS2 1198 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 SLC16A4O15374 487 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 ERLIN2O94905 339 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 ZNF202O95125 648 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 AMHP03971 560 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 AFMP43652 599 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 EFNA5P52803 228 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 SMTNP53814 917 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 DSC3Q14574 896 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 PCBP1Q15365 356 aaKnown RBP eCLIP15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 LINC01599Q8WXQ3 324 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 ADAM2Q99965 735 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 C7orf25Q9BPX7 421 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 TRIM9Q9C026 710 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 TSPYL2Q9H2G4 693 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 CHST12Q9NRB3 414 aa15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 PRMT7Q9NVM4 692 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-208ENST00000466601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 K7ERI5 159 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 TRAK2O60296 914 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 PRPF40AO75400 957 aaKnown RBP15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 IDEP14735 1019 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 LIG1P18858 919 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 DEFB103AP81534 67 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 NCBP1Q09161 790 aaKnown RBP15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 MAPK6Q16659 721 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 AMHR2Q16671 573 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 CNNM4Q6P4Q7 775 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 GRAMD1CQ8IYS0 662 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 FMR1NBQ8N0W7 255 aaPredicted RBP15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 CNNM3Q8NE01 707 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 PHOSPHO2Q8TCD6 241 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 PAGE5Q96GU1 130 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 GBP4Q96PP9 640 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 SLC9A7Q96T83 725 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 CCDC113Q9H0I3 377 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 FZD8Q9H461 694 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 TMEM134Q9H6X4 195 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 RGS18Q9NS28 235 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 C1orf112Q9NSG2 853 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 AGPAT5Q9NUQ2 364 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 PANK4Q9NVE7 773 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 ARHGAP28Q9P2N2 729 aa15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 PIN4Q9Y237 131 aaKnown RBP15.94■□□□□ 0.14
DNMT3A-208ENST00000466601 TSPAN1O60635 241 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 PRKCBP05771 671 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 ATP2A2P16615 1042 aaKnown RBP15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 GAP43P17677 238 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 AXLP30530 894 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 HOXA11P31270 313 aaPredicted RBP15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 NCKAP1LP55160 1127 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 UBE2HP62256 183 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 ASIC1P78348 528 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 FAM160A1Q05DH4 1040 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 FAM187BQ17R55 369 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 KRBA2Q6ZNG9 492 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 SFR1Q86XK3 245 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 CCDC65Q8IXS2 484 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 TMEM161BQ8NDZ6 487 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 ENGASEQ8NFI3 743 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 PRIMPOLQ96LW4 560 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 BLZF1Q9H2G9 400 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 DACT1Q9NYF0 836 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 SEL1LQ9UBV2 794 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 PHLPP2Q6ZVD8 1323 aa15.93■□□□□ 0.14
DNMT3A-208ENST00000466601 MICAL3Q7RTP6 2002 aa15.92■□□□□ 0.14
DNMT3A-208ENST00000466601 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.92■□□□□ 0.14
DNMT3A-208ENST00000466601 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.92■□□□□ 0.14
DNMT3A-208ENST00000466601 FRMD3A2A2Y4 597 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms